Difference between revisions of "CADAVERINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1,2-dihydroxy-3-keto-5-methyl...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19148 CPD-19148] == * smiles: ** CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19148 CPD-19148] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* inchi key:
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** InChIKey=RCVJZGBRLGUTKT-CGGPSVLLSA-J
 
* common name:
 
* common name:
** 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
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** (5Z)-dodecenoyl-CoA
* ec number:
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* molecular weight:
** [http://enzyme.expasy.org/EC/1.13.11.54 EC-1.13.11.54]
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** 943.792   
 
* Synonym(s):
 
* Synonym(s):
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** 12:1-Δ5-CoA
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** cis-5-tetradecenoyl-CoA
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** 12:1(n-7)-CoA
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** (5Z)-tetradec-5-enoyl-CoA
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-17796]]
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-85]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-479]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 oxygen[c] '''+''' 1 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one[c] '''=>''' 1 formate[c] '''+''' 1 H+[c] '''+''' 1 2-oxo-4-methylthiobutanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-20_000070]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: smiles=CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24504 24504]
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{{#set: inchi key=InChIKey=RCVJZGBRLGUTKT-CGGPSVLLSA-J}}
* LIGAND-RXN:
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{{#set: common name=(5Z)-dodecenoyl-CoA}}
** [http://www.genome.jp/dbget-bin/www_bget?R07364 R07364]
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{{#set: molecular weight=943.792    }}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=12:1-Δ5-CoA|cis-5-tetradecenoyl-CoA|12:1(n-7)-CoA|(5Z)-tetradec-5-enoyl-CoA}}
{{#set: common name=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase}}
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{{#set: consumed by=RXN-17796}}
{{#set: ec number=EC-1.13.11.54}}
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{{#set: gene associated=Ec-20_000070}}
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{{#set: in pathway=PWY-4361}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:57, 21 March 2018

Metabolite CPD-19148

  • smiles:
    • CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=RCVJZGBRLGUTKT-CGGPSVLLSA-J
  • common name:
    • (5Z)-dodecenoyl-CoA
  • molecular weight:
    • 943.792
  • Synonym(s):
    • 12:1-Δ5-CoA
    • cis-5-tetradecenoyl-CoA
    • 12:1(n-7)-CoA
    • (5Z)-tetradec-5-enoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.