Difference between revisions of "Ec-18 003740"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenolpyruvate...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8120 CPD-8120] == * smiles: ** CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-] * common name: ** di-homo-&g...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8120 CPD-8120] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-]
 
* common name:
 
* common name:
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** Phosphoenolpyruvate carboxylase
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** di-homo-γ-linolenate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/4.1.1.31 EC-4.1.1.31]
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** InChIKey=HOBAELRKJCKHQD-QNEBEIHSSA-M
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* molecular weight:
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** 305.479   
 
* Synonym(s):
 
* Synonym(s):
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** (8Z,11Z,14Z)-eicosatrienoic acid
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** DGLA
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** (8Z,11Z,14Z)-eicosatri-8,11,14-enoate
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** (8Z,11Z,14Z)-icosatrienoate
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** di-homo-γ-linolenic acid
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** (Z,Z,Z)-8,11,14-eicosatrienoic acid
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** (Z,Z,Z)-8,11,14-eicosatrienoate
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** (8Z,11Z,14Z)-eicosatrienoate
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** (8Z,11Z,14Z)-icosatrienoic acid
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** (8Z,11Z,14Z)-icosa-8,11,14-trienoate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[HCO3]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[OXALACETIC_ACID]][c]
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* [[RXN-13435]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 hydrogen carbonate[c] '''+''' 1 phosphoenolpyruvate[c] '''=>''' 1 phosphate[c] '''+''' 1 oxaloacetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-28_003470]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
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** '''8''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-1622]], formaldehyde assimilation I (serine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622]
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** '''6''' reactions found over '''13''' reactions in the full pathway
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* [[PWYQT-4429]], CO2 fixation into oxaloacetate (anaplerotic): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4429 PWYQT-4429]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
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** '''9''' reactions found over '''16''' reactions in the full pathway
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* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
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** '''8''' reactions found over '''16''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* Wikipedia : Dihomo-gamma-linolenic_acid
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** [http://www.genome.jp/dbget-bin/www_bget?R00345 R00345]
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21158448 21158448]
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** [http://www.uniprot.org/uniprot/P28594 P28594]
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* HMDB : HMDB02925
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** [http://www.uniprot.org/uniprot/P43920 P43920]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P29195 P29195]
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** [http://www.genome.jp/dbget-bin/www_bget?C03242 C03242]
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** [http://www.uniprot.org/uniprot/P51059 P51059]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P00864 P00864]
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** [http://www.chemspider.com/Chemical-Structure.20117973.html 20117973]
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** [http://www.uniprot.org/uniprot/P12880 P12880]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P10490 P10490]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=71589 71589]
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** [http://www.uniprot.org/uniprot/P16097 P16097]
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{{#set: smiles=CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/P27154 P27154]
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{{#set: common name=di-homo-γ-linolenate}}
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** [http://www.uniprot.org/uniprot/P06516 P06516]
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{{#set: inchi key=InChIKey=HOBAELRKJCKHQD-QNEBEIHSSA-M}}
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** [http://www.uniprot.org/uniprot/Q43267 Q43267]
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{{#set: molecular weight=305.479    }}
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** [http://www.uniprot.org/uniprot/Q41197 Q41197]
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{{#set: common name=(8Z,11Z,14Z)-eicosatrienoic acid|DGLA|(8Z,11Z,14Z)-eicosatri-8,11,14-enoate|(8Z,11Z,14Z)-icosatrienoate|di-homo-γ-linolenic acid|(Z,Z,Z)-8,11,14-eicosatrienoic acid|(Z,Z,Z)-8,11,14-eicosatrienoate|(8Z,11Z,14Z)-eicosatrienoate|(8Z,11Z,14Z)-icosatrienoic acid|(8Z,11Z,14Z)-icosa-8,11,14-trienoate}}
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** [http://www.uniprot.org/uniprot/P29194 P29194]
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{{#set: produced by=RXN-13435}}
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** [http://www.uniprot.org/uniprot/P30694 P30694]
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** [http://www.uniprot.org/uniprot/P15804 P15804]
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** [http://www.uniprot.org/uniprot/Q43268 Q43268]
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** [http://www.uniprot.org/uniprot/Q01647 Q01647]
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** [http://www.uniprot.org/uniprot/Q01648 Q01648]
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** [http://www.uniprot.org/uniprot/Q02735 Q02735]
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** [http://www.uniprot.org/uniprot/Q02909 Q02909]
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** [http://www.uniprot.org/uniprot/Q42730 Q42730]
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** [http://www.uniprot.org/uniprot/Q41198 Q41198]
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** [http://www.uniprot.org/uniprot/P51063 P51063]
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** [http://www.uniprot.org/uniprot/Q40103 Q40103]
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** [http://www.uniprot.org/uniprot/Q40104 Q40104]
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** [http://www.uniprot.org/uniprot/Q40105 Q40105]
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** [http://www.uniprot.org/uniprot/Q40102 Q40102]
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** [http://www.uniprot.org/uniprot/Q41836 Q41836]
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** [http://www.uniprot.org/uniprot/O22118 O22118]
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** [http://www.uniprot.org/uniprot/O22119 O22119]
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** [http://www.uniprot.org/uniprot/O48623 O48623]
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** [http://www.uniprot.org/uniprot/Q42634 Q42634]
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** [http://www.uniprot.org/uniprot/O23946 O23946]
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** [http://www.uniprot.org/uniprot/O23947 O23947]
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** [http://www.uniprot.org/uniprot/Q84VW9 Q84VW9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phosphoenolpyruvate carboxylase}}
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{{#set: ec number=EC-4.1.1.31}}
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{{#set: gene associated=Ec-28_003470}}
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{{#set: in pathway=PWY-7124|PWY-1622|PWYQT-4429|PWY-6549|P23-PWY|PWY-5913|PWY-7117|PWY-7115|PWY-6142|PWY-241|PWY-6146|FERMENTATION-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:57, 21 March 2018

Metabolite CPD-8120

  • smiles:
    • CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-]
  • common name:
    • di-homo-γ-linolenate
  • inchi key:
    • InChIKey=HOBAELRKJCKHQD-QNEBEIHSSA-M
  • molecular weight:
    • 305.479
  • Synonym(s):
    • (8Z,11Z,14Z)-eicosatrienoic acid
    • DGLA
    • (8Z,11Z,14Z)-eicosatri-8,11,14-enoate
    • (8Z,11Z,14Z)-icosatrienoate
    • di-homo-γ-linolenic acid
    • (Z,Z,Z)-8,11,14-eicosatrienoic acid
    • (Z,Z,Z)-8,11,14-eicosatrienoate
    • (8Z,11Z,14Z)-eicosatrienoate
    • (8Z,11Z,14Z)-icosatrienoic acid
    • (8Z,11Z,14Z)-icosa-8,11,14-trienoate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCC=CCC=CCC=CCCCCCCC(=O)[O-" cannot be used as a page name in this wiki.



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