Difference between revisions of "Ec-01 004250"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] == * smiles: ** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O * inchi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] ==
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* smiles:
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* direction:
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** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L
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* common name:
 
* common name:
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** dAMP
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** nucleoside diphosphate kinase
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* molecular weight:
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** Nucleoside diphosphate kinase
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** 329.208   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxyadenosine 5'-phosphate
 
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** deoxyadenosine-phosphate
 
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** 2'-deoxyadenosine 5''-monophosphate
 
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** 2'-dAMP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14195]]
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** 1 [[UDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UTP]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-14215]]
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** 1 UDP[c] '''+''' 1 ATP[c] '''=>''' 1 UTP[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_000140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-22_003280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_005170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 653-63-4
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* RHEA:
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* BIGG : 34735
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25098 25098]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=22848660 22848660]
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** [http://www.genome.jp/dbget-bin/www_bget?R00156 R00156]
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* HMDB : HMDB00905
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=nucleoside diphosphate kinase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00360 C00360]
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{{#set: common name=Nucleoside diphosphate kinase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-2.7.4.6}}
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** [http://www.chemspider.com/Chemical-Structure.18735032.html 18735032]
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{{#set: gene associated=Ec-07_000140|Ec-26_003930|Ec-11_004330|Ec-04_001140|Ec-22_003280|Ec-03_001380|Ec-11_005170}}
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* CHEBI:
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{{#set: in pathway=PWY-7176}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58245 58245]
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{{#set: reconstruction category=orthology|annotation}}
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* METABOLIGHTS : MTBLC58245
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: smiles=C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L}}
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{{#set: common name=dAMP}}
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{{#set: molecular weight=329.208    }}
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{{#set: common name=2'-deoxyadenosine 5'-phosphate|deoxyadenosine-phosphate|2'-deoxyadenosine 5''-monophosphate|2'-dAMP}}
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{{#set: produced by=RXN-14195}}
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{{#set: reversible reaction associated=RXN-14215}}
+

Revision as of 13:57, 21 March 2018

Reaction UDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 ATP[c] => 1 UTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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