Difference between revisions of "RXN-13322"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13322 RXN-13322] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-ketoacyl-CoA synthase * e...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13322 RXN-13322] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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* common name:
 
* common name:
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** pyrimidine deoxyribonucleotides biosynthesis from CTP
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** 3-ketoacyl-CoA synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[CDPREDUCT-RXN]]
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OLEOYL-COA]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-14300]][c] '''+''' 1 [[CO-A]][c]
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** 7 associated gene(s):
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* With common name(s):
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*** [[Ec-19_000440]]
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** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 oleoyl-CoA[c] '''=>''' 1 CO2[c] '''+''' 1 3-oxo-(11Z)-eicos-11-enoyl-CoA[c] '''+''' 1 coenzyme A[c]
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*** [[Ec-06_005120]]
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*** [[Ec-06_005570]]
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== Genes associated with this reaction  ==
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*** [[Ec-21_002920]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-17_003700]]
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* Gene: [[Ec-28_003080]]
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*** [[Ec-11_002170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-11_002180]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6433]], hydroxylated fatty acid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6433 PWY-6433]
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*** [[orthology-aragem]]
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** '''7''' reactions found over '''22''' reactions in the full pathway
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* [[DCDPKIN-RXN]]
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== Reconstruction information  ==
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** 7 associated gene(s):
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* Category: [[annotation]]
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*** [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-11_005170]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-26_003930]]
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*** [[Ec-22_003280]]
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*** [[Ec-07_000140]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DCMP-DEAMINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-12_003010]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[DTDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-26_003930]]
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*** [[Ec-07_000140]]
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*** [[Ec-03_001380]]
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*** [[Ec-22_003280]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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*** [[Ec-11_005170]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_004950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-12195]]
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** 9 associated gene(s):
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*** [[Ec-05_005340]]
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*** [[Ec-03_004860]]
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*** [[Ec-02_005730]]
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*** [[Ec-17_000870]]
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*** [[Ec-18_004660]]
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*** [[Ec-28_000420]]
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*** [[Ec-03_001180]]
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*** [[Ec-01_003690]]
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*** [[Ec-06_005470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14187]]
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** 1 associated gene(s):
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*** [[Ec-02_001970]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_004630]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: common name=3-ketoacyl-CoA synthase}}
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{{#set: taxonomic range=TAX-1239}}
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{{#set: ec number=EC-2.3.1.199}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: gene associated=Ec-28_003080}}
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{{#set: common name=pyrimidine deoxyribonucleotides biosynthesis from CTP}}
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{{#set: in pathway=PWY-6433}}
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{{#set: reaction found=8}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=8}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:00, 21 March 2018

Reaction RXN-13322

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-ketoacyl-CoA synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6433, hydroxylated fatty acid biosynthesis (plants): PWY-6433
    • 7 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13322&oldid=23711"