Difference between revisions of "RXN-8497"

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(Created page with "Category:Gene == Gene Ec-02_006160 == * left end position: ** 6300831 * transcription direction: ** POSITIVE * right end position: ** 6305312 * centisome position: ** 96.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8497 RXN-8497] == * direction: ** LEFT-TO-RIGHT * common name: ** linolenate 9S-lipoxygenase *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-02_006160 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8497 RXN-8497] ==
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* left end position:
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* direction:
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** 6300831
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** linolenate 9S-lipoxygenase
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* right end position:
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* ec number:
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** 6305312
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** [http://enzyme.expasy.org/EC/1.13.11 EC-1.13.11]
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* centisome position:
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** 96.52317   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0082_0107
 
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** Esi0082_0107
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
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* With identifiers:
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** Source: [[annotation-esiliculosus_genome]]
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** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-8678]][c]
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*** Assignment: automated-name-match
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* With common name(s):
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* Reaction: [[RXN-15043]]
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** 1 α-linolenate[c] '''+''' 1 oxygen[c] '''=>''' 1 9(S)-HPOTE[c]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-16025]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-03_000010]]
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-16032]]
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* Gene: [[Ec-20_003630]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: automated-name-match
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* Gene: [[Ec-20_003620]]
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* Reaction: [[RXN-16066]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-03_000020]]
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-16067]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5406]], divinyl ether biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5406 PWY-5406]
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*** Assignment: automated-name-match
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-16076]]
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* [[PWY-5407]], 9-lipoxygenase and 9-allene oxide synthase pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5407 PWY-5407]
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** Source: [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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*** Assignment: automated-name-match
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* [[PWY-6917]], vernolate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6917 PWY-6917]
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* Reaction: [[RXN-16077]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5408]], 9-lipoxygenase and 9-hydroperoxide lyase pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5408 PWY-5408]
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*** Assignment: automated-name-match
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-16118]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[orthology]]
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*** Assignment: automated-name-match
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-1623]]
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*** Tool: [[pantograph]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17008]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17009]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17010]]
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** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: automated-name-match
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* Reaction: [[RXN-17011]]
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** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: automated-name-match
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* Reaction: [[RXN-17012]]
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** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: automated-name-match
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* Reaction: [[RXN-17013]]
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** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: automated-name-match
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* Reaction: [[RXN-17014]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17015]]
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** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: automated-name-match
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* Reaction: [[RXN-17019]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17021]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17022]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17023]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17024]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17729]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5514]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-6705]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TRIGLSYN-PWY]]
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* [[PWY-7411]]
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* [[PWY-7589]]
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* [[PWY-7782]]
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* [[PWY-5667]]
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* [[PWY-5981]]
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* [[PWY-7417]]
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* [[PWY0-1319]]
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* [[PWY-7587]]
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* [[PWY-6453]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=6300831}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07864 R07864]
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{{#set: right end position=6305312}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=96.52317    }}
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{{#set: common name=linolenate 9S-lipoxygenase}}
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{{#set: common name=Esi_0082_0107|Esi0082_0107}}
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{{#set: ec number=EC-1.13.11}}
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{{#set: reaction associated=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN|RXN-15043|RXN-16025|RXN-16032|RXN-16066|RXN-16067|RXN-16076|RXN-16077|RXN-16118|RXN-1623|RXN-17008|RXN-17009|RXN-17010|RXN-17011|RXN-17012|RXN-17013|RXN-17014|RXN-17015|RXN-17019|RXN-17020|RXN-17021|RXN-17022|RXN-17023|RXN-17024|RXN-17729|RXN0-5514|RXN0-6705}}
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{{#set: gene associated=Ec-03_000010|Ec-20_003630|Ec-20_003620|Ec-03_000020}}
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{{#set: pathway associated=TRIGLSYN-PWY|PWY-7411|PWY-7589|PWY-7782|PWY-5667|PWY-5981|PWY-7417|PWY0-1319|PWY-7587|PWY-6453}}
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{{#set: in pathway=PWY-5406|PWY-5407|PWY-6917|PWY-5408}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:00, 21 March 2018

Reaction RXN-8497

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • linolenate 9S-lipoxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5406, divinyl ether biosynthesis I: PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407, 9-lipoxygenase and 9-allene oxide synthase pathway: PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6917, vernolate biosynthesis III: PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5408, 9-lipoxygenase and 9-hydroperoxide lyase pathway: PWY-5408
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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