Difference between revisions of "RXN-15378"

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(Created page with "Category:Gene == Gene Ec-03_000880 == * left end position: ** 1092099 * transcription direction: ** POSITIVE * right end position: ** 1094949 * centisome position: ** 16.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate dehydrogenase/fum...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-03_000880 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15378 RXN-15378] ==
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* left end position:
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* direction:
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** 1092099
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
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* right end position:
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** SDH4, succinate dehydrogenase subunit 4
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** 1094949
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** SDH1, succinate dehydrogenase subunit 1
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* centisome position:
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** SDH3, succinate dehydrogenase subunit 3
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** 16.727764   
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** SDH2, succinate dehydrogenase subunit 2
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0027_0013
 
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** Esi0027_0013
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[RXN-8668]]
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* With identifiers:
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** 1 [[CPD-9612]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[CPD-15301]][c]
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* With common name(s):
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** 1 caldariellaquinone[c] '''+''' 1 succinate[c] '''=>''' 1 fumarate[c] '''+''' 1 caldariellaquinol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_007310]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-11_000360]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-05_003640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-27_006560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-07_002870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-21_003470]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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== External links  ==
 
== External links  ==
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{{#set: left end position=1092099}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
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{{#set: right end position=1094949}}
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{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
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{{#set: centisome position=16.727764    }}
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{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
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{{#set: common name=Esi_0027_0013|Esi0027_0013}}
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{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
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{{#set: reaction associated=RXN-8668}}
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{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
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{{#set: ec number=EC-1.3.5.1}}
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{{#set: gene associated=Ec-07_007310|Ec-11_000360|Ec-05_003640|Ec-27_006560|Ec-07_002870|Ec-21_003470}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:02, 21 March 2018

Reaction RXN-15378

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
    • SDH4, succinate dehydrogenase subunit 4
    • SDH1, succinate dehydrogenase subunit 1
    • SDH3, succinate dehydrogenase subunit 3
    • SDH2, succinate dehydrogenase subunit 2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 caldariellaquinone[c] + 1 succinate[c] => 1 fumarate[c] + 1 caldariellaquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15378&oldid=24080"