Difference between revisions of "Ec-19 001460"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
(Created page with "Category:Gene == Gene Ec-19_001460 == * left end position: ** 1619734 * transcription direction: ** NEGATIVE * right end position: ** 1622128 * centisome position: ** 27.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] ==
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== Gene Ec-19_001460 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1619734
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* common name:
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* transcription direction:
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** Tryptophan synthase beta subunit-like PLP-dependent enzyme
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** NEGATIVE
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** Cysteine synthase
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* right end position:
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* ec number:
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** 1622128
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** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
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* centisome position:
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** 27.128098   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0121_0045
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** Esi0121_0045
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-2601]]
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** 1 [[CPD-678]][c] '''+''' 1 [[ACETYLSERINE]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 hydrogen selenide[c] '''+''' 1 O-acetyl-L-serine[c] '''=>''' 1 acetate[c] '''+''' 1 L-selenocysteine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_011260]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-01_012080]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-00_008830]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1619734}}
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{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Cysteine synthase}}
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{{#set: right end position=1622128}}
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{{#set: ec number=EC-2.5.1.47}}
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{{#set: centisome position=27.128098    }}
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{{#set: gene associated=Ec-01_011260|Ec-01_012080|Ec-00_008830}}
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{{#set: common name=Esi_0121_0045|Esi0121_0045}}
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{{#set: in pathway=PWY-6936}}
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{{#set: reaction associated=RXN0-2601}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:04, 21 March 2018

Gene Ec-19_001460

  • left end position:
    • 1619734
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1622128
  • centisome position:
    • 27.128098
  • Synonym(s):
    • Esi_0121_0045
    • Esi0121_0045

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_001460&oldid=24361"