Difference between revisions of "RXN-34"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-34 RXN-34] == * direction: ** LEFT-TO-RIGHT * common name: ** Ureohydrolase * ec number: ** [ht...")
 
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-34 RXN-34] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
 
* common name:
 
* common name:
** L-glutamate degradation VII (to butanoate)
+
** Ureohydrolase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.3.1 EC-3.5.3.1]
 
* Synonym(s):
 
* Synonym(s):
** L-glutamate fermentation
 
** mesaconate pathway
 
** L-glutamate degradation VII (to butyrate)
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''3''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
* [[CENTFERM-PWY]]
+
** 1 [[CANAVANINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[L-CANALINE]][c] '''+''' 1 [[PROTON]][c]
** 0 associated gene:
+
* With common name(s):
* [[HYDROG-RXN]]
+
** 1 L-canavanine[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 L-canaline[c] '''+''' 1 H+[c]
** 2 associated gene(s):
+
 
*** [[Ec-24_003110]]
+
== Genes associated with this reaction  ==
*** [[Ec-22_001020]]
+
Genes have been associated with this reaction based on different elements listed below.
** 1 reconstruction source(s) associated:
+
* Gene: [[Ec-10_001100]]
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
* [[PYRUFLAVREDUCT-RXN]]
+
*** Assignment: EC-NUMBER
** 3 associated gene(s):
+
== Pathways  ==
*** [[Ec-18_003420]]
+
* [[PWY-31]], canavanine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-31 PWY-31]
*** [[Ec-15_004230]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
*** [[Ec-23_002710]]
+
== Reconstruction information  ==
** 1 reconstruction source(s) associated:
+
* Category: [[annotation]]
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
== Reaction(s) not found ==
+
*** Tool: [[pathwaytools]]
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5087 PWY-5087]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5087 PWY-5087]
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-1239}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-1224}}
+
{{#set: common name=Ureohydrolase}}
{{#set: common name=L-glutamate degradation VII (to butanoate)}}
+
{{#set: ec number=EC-3.5.3.1}}
{{#set: common name=L-glutamate fermentation|mesaconate pathway|L-glutamate degradation VII (to butyrate)}}
+
{{#set: gene associated=Ec-10_001100}}
{{#set: reaction found=3}}
+
{{#set: in pathway=PWY-31}}
{{#set: total reaction=6}}
+
{{#set: reconstruction category=annotation}}
{{#set: completion rate=50.0}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:05, 21 March 2018

Reaction RXN-34

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ureohydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-canavanine[c] + 1 H2O[c] => 1 urea[c] + 1 L-canaline[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-31, canavanine degradation: PWY-31
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links