Difference between revisions of "RXN-8342"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA-DNA hybrid ribonu...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8342 RXN-8342] == * direction: ** LEFT-TO-RIGHT * common name: ** molybdopterin synthase * ec n...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.4-RXN 3.1.26.4-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8342 RXN-8342] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** RNA-DNA hybrid ribonuclease
+
** molybdopterin synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.26.4 EC-3.1.26.4]
+
** [http://enzyme.expasy.org/EC/2.8.1.12 EC-2.8.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** n [[WATER]][c] '''+''' 1 [[RNA-DNA-hybrids]][c] '''=>''' 1 [[DNA-Holder]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
+
** 1 [[PRECURSOR-Z]][c] '''+''' 2 [[Thiocarboxylated-MPT-synthases]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[PROTON]][c] '''+''' 2 [[MPT-Synthases]][c] '''+''' 1 [[CPD-4]][c]
 
* With common name(s):
 
* With common name(s):
−
** n H2O[c] '''+''' 1 a RNA-DNA hybrid[c] '''=>''' 1 DNA[c] '''+''' n a nucleoside 5'-monophosphate[c]
+
** 1 cyclic pyranopterin phosphate[c] '''+''' 2 a thiocarboxylated small subunit of molybdopterin synthase[c] '''+''' 1 H2O[c] '''=>''' 4 H+[c] '''+''' 2 a small subunit of molybdopterin synthase[c] '''+''' 1 molybdopterin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-25_002560]]
+
* Gene: [[Ec-11_005720]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-17_003740]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-22_003570]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 32: Line 28:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P52975 P52975]
 
−
** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
 
−
** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
 
−
** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
 
−
** [http://www.uniprot.org/uniprot/P43807 P43807]
 
−
** [http://www.uniprot.org/uniprot/P43808 P43808]
 
−
** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
 
−
** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
 
−
** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
 
−
** [http://www.uniprot.org/uniprot/Q57599 Q57599]
 
−
** [http://www.uniprot.org/uniprot/O44114 O44114]
 
−
** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
 
−
** [http://www.uniprot.org/uniprot/P10442 P10442]
 
−
** [http://www.uniprot.org/uniprot/P13319 P13319]
 
−
** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
 
−
** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
 
−
** [http://www.uniprot.org/uniprot/Q04740 Q04740]
 
−
** [http://www.uniprot.org/uniprot/Q49050 Q49050]
 
−
** [http://www.uniprot.org/uniprot/O69014 O69014]
 
−
** [http://www.uniprot.org/uniprot/Q54222 Q54222]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=RNA-DNA hybrid ribonuclease}}
+
{{#set: common name=molybdopterin synthase}}
−
{{#set: ec number=EC-3.1.26.4}}
+
{{#set: ec number=EC-2.8.1.12}}
−
{{#set: gene associated=Ec-25_002560|Ec-17_003740|Ec-22_003570}}
+
{{#set: gene associated=Ec-11_005720}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6823}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction RXN-8342

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • molybdopterin synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-8342&oldid=24604"