Difference between revisions of "Ec-03 000220"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14240 RXN-14240] == * direction: ** LEFT-TO-RIGHT * common name: ** baicalein peroxidase ** per...")
(Created page with "Category:Gene == Gene Ec-03_000220 == * left end position: ** 288161 * transcription direction: ** POSITIVE * right end position: ** 311312 * centisome position: ** 4.4137...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14240 RXN-14240] ==
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== Gene Ec-03_000220 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 288161
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* common name:
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* transcription direction:
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** baicalein peroxidase
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** POSITIVE
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** peroxidase
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* right end position:
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* ec number:
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** 311312
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** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
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* centisome position:
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** 4.413784   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0027_0149
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** Esi0027_0149
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** DAD, n-term
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12724]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-15172]][c]
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* With common name(s):
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** 1 hydrogen peroxide[c] '''+''' 1 baicalein[c] '''=>''' 2 H2O[c] '''+''' 1 6,7-dehydrobaicalein[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-20_002770]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-02_001880]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-02_001740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-04_004690]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-00_008240]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-00_008250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-00_008220]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-14_002880]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-05_003380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-02_000470]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-19_000230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-02_001210]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-27_004950]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_000310]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_003410]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-00_010030]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-00_008210]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_001530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-16_000240]]
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** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: GO-TERM
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−
* Gene: [[Ec-08_006020]]
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−
** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: GO-TERM
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−
* Gene: [[Ec-05_002520]]
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−
** Source: [[annotation-esiliculosus_genome]]
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−
*** Assignment: GO-TERM
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* Gene: [[Ec-28_003740]]
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−
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-24_002030]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-17_002430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-24_002370]]
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−
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-19_001450]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-17_002450]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-06_003550]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: ec-number
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* Gene: [[Ec-02_003170]]
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** Source: [[orthology-aragem]]
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* Reaction: [[DIHYDROXYMETVALDEHYDRAT-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: ec-number
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* Gene: [[Ec-14_006530]]
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** Source: [[orthology-aragem]]
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* Reaction: [[PGLUCONDEHYDRAT-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN-11717]]
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* [[PWY-7214]], baicalein degradation (hydrogen peroxide detoxification): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7214 PWY-7214]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[ILEUSYN-PWY]]
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* [[VALSYN-PWY]]
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* [[PWY-7111]]
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* [[ENTNER-DOUDOROFF-PWY]]
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* [[PWY-5103]]
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* [[PWY-5101]]
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* [[PWY-6627]]
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* [[PWY-5104]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=288161}}
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{{#set: common name=baicalein peroxidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=peroxidase}}
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{{#set: right end position=311312}}
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{{#set: ec number=EC-1.11.1.7}}
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{{#set: centisome position=4.413784    }}
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{{#set: gene associated=Ec-20_002770|Ec-02_001880|Ec-02_001740|Ec-04_004690|Ec-00_008240|Ec-00_008250|Ec-00_008220|Ec-14_002880|Ec-05_003380|Ec-02_000470|Ec-19_000230|Ec-02_001210|Ec-27_004950|Ec-26_000310|Ec-11_003410|Ec-00_010030|Ec-00_008210|Ec-11_001530|Ec-16_000240|Ec-08_006020|Ec-05_002520|Ec-28_003740|Ec-24_002030|Ec-17_002430|Ec-24_002370|Ec-19_001450|Ec-17_002450|Ec-06_003550|Ec-02_003170|Ec-14_006530}}
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{{#set: common name=Esi_0027_0149|Esi0027_0149|DAD, n-term}}
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{{#set: in pathway=PWY-7214}}
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{{#set: reaction associated=DIHYDROXYISOVALDEHYDRAT-RXN|DIHYDROXYMETVALDEHYDRAT-RXN|PGLUCONDEHYDRAT-RXN|RXN-11717}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=ILEUSYN-PWY|VALSYN-PWY|PWY-7111|ENTNER-DOUDOROFF-PWY|PWY-5103|PWY-5101|PWY-6627|PWY-5104}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:07, 21 March 2018

Gene Ec-03_000220

  • left end position:
    • 288161
  • transcription direction:
    • POSITIVE
  • right end position:
    • 311312
  • centisome position:
    • 4.413784
  • Synonym(s):
    • Esi_0027_0149
    • Esi0027_0149
    • DAD, n-term

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_000220&oldid=24736"