Difference between revisions of "ACETATE--COA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1404 RXN-1404] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Acetate-CoA ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.5.1 EC-3.5.5.1]
+
** [http://enzyme.expasy.org/EC/6.2.1.1 EC-6.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ACET]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 indole-3-acetonitrile[c] '''+''' 2 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 indole-3-acetate[c]
+
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 acetate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-01_002370]]
+
* Gene: [[Ec-21_006210]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* Gene: [[Ec-26_000350]]
+
*** Assignment: EC-NUMBER
−
** Source: [[orthology-aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
+
* [[PWY66-161]], oxidative ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5026 PWY-5026]
+
* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1313]], acetate conversion to acetyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1313 PWY0-1313]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWYQT-4476]], indole glucosinolate breakdown (insect chewing induced): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4476 PWYQT-4476]
+
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
−
** '''1''' reactions found over '''14''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P27095 P27095]
 +
** [http://www.uniprot.org/uniprot/P31638 P31638]
 +
** [http://www.uniprot.org/uniprot/Q12662 Q12662]
 +
** [http://www.uniprot.org/uniprot/P28812 P28812]
 +
** [http://www.uniprot.org/uniprot/P27550 P27550]
 +
** [http://www.uniprot.org/uniprot/O34613 O34613]
 +
** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
 +
** [http://www.uniprot.org/uniprot/P36333 P36333]
 +
** [http://www.uniprot.org/uniprot/Q01574 Q01574]
 +
** [http://www.uniprot.org/uniprot/P39062 P39062]
 +
** [http://www.uniprot.org/uniprot/Q01576 Q01576]
 +
** [http://www.uniprot.org/uniprot/P52910 P52910]
 +
** [http://www.uniprot.org/uniprot/Q55404 Q55404]
 +
** [http://www.uniprot.org/uniprot/P16928 P16928]
 +
** [http://www.uniprot.org/uniprot/P16929 P16929]
 +
** [http://www.uniprot.org/uniprot/O68040 O68040]
 +
** [http://www.uniprot.org/uniprot/P78773 P78773]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.5.5.1}}
+
{{#set: common name=Acetate-CoA ligase}}
−
{{#set: gene associated=Ec-01_002370|Ec-26_000350}}
+
{{#set: ec number=EC-6.2.1.1}}
−
{{#set: in pathway=PWY-581|PWY-5026|PWYQT-4476}}
+
{{#set: gene associated=Ec-21_006210}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY66-161|PWY66-21|PWY66-162|PWY0-1313|PWY-6672|PWY-7118}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:08, 21 March 2018

Reaction ACETATE--COA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acetate-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 acetate[c] => 1 AMP[c] + 1 diphosphate[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-161, oxidative ethanol degradation III: PWY66-161
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-21, ethanol degradation II: PWY66-21
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-162, ethanol degradation IV: PWY66-162
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1313, acetate conversion to acetyl-CoA: PWY0-1313
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-7118, chitin degradation to ethanol: PWY-7118
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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