Difference between revisions of "ACETYL-COA-CARBOXYLTRANSFER-RXN"

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(Created page with "Category:Gene == Gene Ec-03_000220 == * left end position: ** 288161 * transcription direction: ** POSITIVE * right end position: ** 311312 * centisome position: ** 4.4137...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-03_000220 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-CARBOXYLTRANSFER-RXN ACETYL-COA-CARBOXYLTRANSFER-RXN] ==
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* left end position:
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* direction:
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** 288161
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Acetyl-CoA carboxylase, partial
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* right end position:
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** acetyl-CoA carboxylase
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** 311312
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.4.1.2 EC-6.4.1.2]
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** 4.413784   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0027_0149
 
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** Esi0027_0149
 
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** DAD, n-term
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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* With identifiers:
 +
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c]
 +
* With common name(s):
 +
** 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 malonyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-19_003040]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-03_001890]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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* Reaction: [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-14_002460]]
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
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* Gene: [[Ec-01_009720]]
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** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_010970]]
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_003230]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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* Reaction: [[PGLUCONDEHYDRAT-RXN]]
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** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-20_002520]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN-11717]]
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** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6722]], candicidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6722 PWY-6722]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6679]], jadomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6679 PWY-6679]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
+
−
* [[ILEUSYN-PWY]]
+
−
* [[VALSYN-PWY]]
+
−
* [[PWY-7111]]
+
−
* [[ENTNER-DOUDOROFF-PWY]]
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−
* [[PWY-5103]]
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−
* [[PWY-5101]]
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−
* [[PWY-6627]]
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−
* [[PWY-5104]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=288161}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
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{{#set: right end position=311312}}
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* LIGAND-RXN:
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{{#set: centisome position=4.413784    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00742 R00742]
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{{#set: common name=Esi_0027_0149|Esi0027_0149|DAD, n-term}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=DIHYDROXYISOVALDEHYDRAT-RXN|DIHYDROXYMETVALDEHYDRAT-RXN|PGLUCONDEHYDRAT-RXN|RXN-11717}}
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{{#set: common name=Acetyl-CoA carboxylase, partial}}
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{{#set: pathway associated=ILEUSYN-PWY|VALSYN-PWY|PWY-7111|ENTNER-DOUDOROFF-PWY|PWY-5103|PWY-5101|PWY-6627|PWY-5104}}
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{{#set: common name=acetyl-CoA carboxylase}}
 +
{{#set: ec number=EC-6.4.1.2}}
 +
{{#set: gene associated=Ec-19_003040|Ec-03_001890|Ec-14_002460|Ec-01_009720|Ec-01_010970|Ec-19_003230|Ec-20_002520}}
 +
{{#set: in pathway=PWY-7388|PWY-5789|PWY-5743|PWY-5744|PWY-6722|PWY-6679|PWY-4381}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:08, 21 March 2018

Reaction ACETYL-COA-CARBOXYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acetyl-CoA carboxylase, partial
    • acetyl-CoA carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 hydrogen carbonate[c] + 1 acetyl-CoA[c] => 1 phosphate[c] + 1 ADP[c] + 1 H+[c] + 1 malonyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation: PWY-5744
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-6722, candicidin biosynthesis: PWY-6722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6679, jadomycin biosynthesis: PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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