Difference between revisions of "RXN-7659"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7659 RXN-7659] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranylgeranyl reductase * Sy...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7659 RXN-7659] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-241806]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3312 TAX-3312]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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* common name:
 
* common name:
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** 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
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** Geranylgeranyl reductase
 
* Synonym(s):
 
* Synonym(s):
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** light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[PROTOPORGENOXI-RXN]]
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** 1 [[CPD-7002]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CPD-7003]][c] '''+''' 1 [[NADP]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-25_003100]]
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** 1 dihydrogeranylgeranyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''+''' 1 NADP+[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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* Gene: [[Ec-03_003520]]
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** 1 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-01_007810]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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* [[RXN0-1461]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-08_001470]]
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* Category: [[annotation]]
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*** [[Ec-19_005390]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN1F-20]]
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** 3 associated gene(s):
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*** [[Ec-14_006490]]
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*** [[Ec-02_001580]]
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*** [[Ec-01_002840]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[UROGENDECARBOX-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_000620]]
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*** [[Ec-01_000360]]
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*** [[Ec-24_000650]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5282 RXN-5282]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5283 RXN-5283]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5284 RXN-5284]
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== External links  ==
 
== External links  ==
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* PLANTCYC : PWY-7159
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-241806}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08755 R08755]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: common name=Geranylgeranyl reductase}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: gene associated=Ec-03_003520}}
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{{#set: taxonomic range=TAX-3312}}
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{{#set: in pathway=PWY-5063}}
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{{#set: taxonomic range=TAX-3208}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction found=5}}
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{{#set: total reaction=9}}
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{{#set: completion rate=56.0}}
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Latest revision as of 19:09, 21 March 2018

Reaction RXN-7659

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Geranylgeranyl reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dihydrogeranylgeranyl diphosphate[c] + 1 H+[c] + 1 NADPH[c] => 1 tetrahydrogeranylgeranyl diphosphate[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7659&oldid=24940"