Difference between revisions of "RXN-15829"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE] == * smiles: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytochrome c1 ** ubiquinol...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15829 RXN-15829] ==
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* smiles:
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* direction:
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** C[S+](CCC(C([O-])=O)=O)CC1(OC(C(C1O)O)N3(C2(=NC=NC(=C2N=C3)N)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UOKVQQMBGVMXPU-CJPDYEHRSA-N
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* common name:
 
* common name:
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** S-adenosyl-4-methylthio-2-oxobutanoate
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** Cytochrome c1
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* molecular weight:
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** ubiquinol cytochrome c reductase subunit QCR9
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** 397.405   
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** Ubiquinol cytochrome reductase, transmembrane domain
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** Ubiquinol-cytochrome C reductase hinge domain
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** Cytochrome b-c1 complex subunit 7
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* ec number:
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** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 2 [[Reduced-CycA1-cytochromes]][e] '''+''' 1 [[Ubiquinones]][c] '''+''' 4 [[PROTON]][c] '''=>''' 2 [[Oxidized-CycA1-cytochromes]][e] '''+''' 1 [[Ubiquinols]][c] '''+''' 2 [[PROTON]][e]
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* [[DAPASYN-RXN]]
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* With common name(s):
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** 2 a reduced CycA1 cytochrome[e] '''+''' 1 a ubiquinone[c] '''+''' 4 H+[c] '''=>''' 2 an oxidized CycA1 cytochrome[e] '''+''' 1 an ubiquinol[c] '''+''' 2 H+[e]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-18_002810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-08_003040]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-25_001440]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-01_002540]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-21_004500]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6692]], Fe(II) oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5459852 5459852]
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{{#set: common name=Cytochrome c1}}
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* CHEMSPIDER:
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{{#set: common name=ubiquinol cytochrome c reductase subunit QCR9}}
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** [http://www.chemspider.com/Chemical-Structure.4573603.html 4573603]
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{{#set: common name=Ubiquinol cytochrome reductase, transmembrane domain}}
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* CHEBI:
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{{#set: common name=Ubiquinol-cytochrome C reductase hinge domain}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16490 16490]
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{{#set: common name=Cytochrome b-c1 complex subunit 7}}
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* BIGG : 43797
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{{#set: ec number=EC-1.10.2.2}}
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* LIGAND-CPD:
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{{#set: gene associated=Ec-18_002810|Ec-08_003040|Ec-25_001440|Ec-01_002540|Ec-21_004500}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04425 C04425]
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{{#set: in pathway=PWY-6692}}
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{{#set: smiles=C[S+](CCC(C([O-])=O)=O)CC1(OC(C(C1O)O)N3(C2(=NC=NC(=C2N=C3)N)))}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=UOKVQQMBGVMXPU-CJPDYEHRSA-N}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=S-adenosyl-4-methylthio-2-oxobutanoate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=397.405    }}
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{{#set: reversible reaction associated=DAPASYN-RXN}}
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Latest revision as of 19:09, 21 March 2018

Reaction RXN-15829

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytochrome c1
    • ubiquinol cytochrome c reductase subunit QCR9
    • Ubiquinol cytochrome reductase, transmembrane domain
    • Ubiquinol-cytochrome C reductase hinge domain
    • Cytochrome b-c1 complex subunit 7
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6692, Fe(II) oxidation: PWY-6692
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15829&oldid=24979"