Difference between revisions of "PWY-6386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN3-RXN THIAZOLSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methyl-5(b-hy...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN3-RXN THIAZOLSYN3-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative
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** UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.50 EC-2.7.1.50]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''8''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[THZ]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[THZ-P]][c]
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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* With common name(s):
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** 7 associated gene(s):
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** 1 ATP[c] '''+''' 1 5-(2-hydroxyethyl)-4-methylthiazole[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 4-methyl-5-(2-phosphooxyethyl)thiazole[c]
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*** [[Ec-16_002060]]
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*** [[Ec-26_003750]]
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== Genes associated with this reaction  ==
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*** [[Ec-03_000110]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-19_003080]]
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* Gene: [[Ec-01_008860]]
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*** [[Ec-21_001860]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-03_000480]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-09_002930]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-6897]], thiamine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6897 PWY-6897]
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*** [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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* [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.10-RXN 6.3.2.10-RXN]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=6.3.2.7-RXN 6.3.2.7-RXN]
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
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* [http://metacyc.org/META/NEW-IMAGE?object=DALADALALIG-RXN DALADALALIG-RXN]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTRACE-RXN GLUTRACE-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMUR-ALA-LIG-RXN UDP-NACMUR-ALA-LIG-RXN]
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-NACMURALA-GLU-LIG-RXN UDP-NACMURALA-GLU-LIG-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-201174}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24212 24212]
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{{#set: taxonomic range=TAX-1239}}
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* LIGAND-RXN:
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{{#set: common name=UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04448 R04448]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P41835 P41835]
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{{#set: completion rate=13.0}}
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** [http://www.uniprot.org/uniprot/O28204 O28204]
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** [http://www.uniprot.org/uniprot/P76423 P76423]
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** [http://www.uniprot.org/uniprot/Q57233 Q57233]
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** [http://www.uniprot.org/uniprot/Q9CG46 Q9CG46]
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** [http://www.uniprot.org/uniprot/P39593 P39593]
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** [http://www.uniprot.org/uniprot/P40386 P40386]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative}}
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{{#set: ec number=EC-2.7.1.50}}
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{{#set: gene associated=Ec-01_008860}}
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{{#set: in pathway=PWY-6897|PWY-7356|PWY-7357}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:13, 21 March 2018

Pathway PWY-6386

  • taxonomic range:
  • common name:
    • UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
  • Synonym(s):

Reaction(s) found

1 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6386&oldid=25377"