Difference between revisions of "Ec-17 003520"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-ARGININE-DEIMINASE-RXN PROTEIN-ARGININE-DEIMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Gene == Gene Ec-17_003520 == * left end position: ** 3706160 * transcription direction: ** NEGATIVE * right end position: ** 3712032 * centisome position: ** 77.2...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-ARGININE-DEIMINASE-RXN PROTEIN-ARGININE-DEIMINASE-RXN] ==
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== Gene Ec-17_003520 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3706160
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* common name:
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* transcription direction:
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** protein-arginine deiminase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.3.15 EC-3.5.3.15]
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** 3712032
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* centisome position:
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** 77.244705   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0166_0045
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** Esi0166_0045
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** SPPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11486]]
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** 1 [[Protein-L-Arginines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTEIN-L-CITRULLINE]][c] '''+''' 1 [[AMMONIUM]][c]
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* With common name(s):
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** 1 a [protein]-L-arginine[c] '''+''' 1 H2O[c] '''=>''' 1 a [protein]-L-citrulline[c] '''+''' 1 ammonium[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_001540]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-9003]]
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* [[PWY-4921]], protein citrullination: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4921 PWY-4921]
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** Source: [[orthology-aragem]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* Reaction: [[RXN-9384]]
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== Reconstruction information  ==
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** Source: [[orthology-aragem]]
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* Category: [[annotation]]
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* Reaction: [[RXN0-5180]]
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** Source: [[orthology-aragem]]
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* Reaction: [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY3O-19]]
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* [[PWY-6520]]
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* [[PWY-7235]]
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* [[PWY-5805]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3706160}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02621 R02621]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=3712032}}
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** [http://www.uniprot.org/uniprot/Q08642 Q08642]
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{{#set: centisome position=77.244705    }}
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** [http://www.uniprot.org/uniprot/P20717 P20717]
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{{#set: common name=Esi_0166_0045|Esi0166_0045|SPPS}}
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** [http://www.uniprot.org/uniprot/P70708 P70708]
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{{#set: reaction associated=RXN-11486|RXN-9003|RXN-9384|RXN0-5180|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY3O-19|PWY-6520|PWY-7235|PWY-5805}}
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{{#set: common name=protein-arginine deiminase}}
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{{#set: ec number=EC-3.5.3.15}}
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{{#set: gene associated=Ec-02_001540}}
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{{#set: in pathway=PWY-4921}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:13, 21 March 2018

Gene Ec-17_003520

  • left end position:
    • 3706160
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3712032
  • centisome position:
    • 77.244705
  • Synonym(s):
    • Esi_0166_0045
    • Esi0166_0045
    • SPPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_003520&oldid=25443"