Difference between revisions of "Ec-01 001660"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Gene == Gene Ec-01_001660 == * left end position: ** 1339138 * transcription direction: ** POSITIVE * right end position: ** 1378030 * centisome position: ** 12.9...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-01_001660 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1339138
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* common name:
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* transcription direction:
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** Cysteinyl-tRNA Synthetase
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** POSITIVE
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** Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
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* right end position:
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** Cysteinyl-tRNA synthetase/mycothiol ligase
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** 1378030
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.1.1.16 EC-6.1.1.16]
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** 12.977609   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0112_0034
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** Esi0112_0034
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[Charged-CYS-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 a tRNAcys[c] '''+''' 1 L-cysteine[c] '''=>''' 1 an L-cysteinyl-[tRNAcys][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-10_004180]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-02_002270]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-12_001440]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7511]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1339138}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=1378030}}
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** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
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{{#set: centisome position=12.977609    }}
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** [http://www.uniprot.org/uniprot/Q06752 Q06752]
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{{#set: common name=Esi_0112_0034|Esi0112_0034}}
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** [http://www.uniprot.org/uniprot/P43816 P43816]
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{{#set: reaction associated=UBIQUITIN--PROTEIN-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/O29836 O29836]
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{{#set: pathway associated=PWY-7511}}
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** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
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** [http://www.uniprot.org/uniprot/O58370 O58370]
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** [http://www.uniprot.org/uniprot/O83129 O83129]
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** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
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** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
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** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
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** [http://www.uniprot.org/uniprot/P41259 P41259]
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** [http://www.uniprot.org/uniprot/O51545 O51545]
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** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
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** [http://www.uniprot.org/uniprot/O67163 O67163]
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** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
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** [http://www.uniprot.org/uniprot/P47495 P47495]
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** [http://www.uniprot.org/uniprot/P75423 P75423]
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** [http://www.uniprot.org/uniprot/P74330 P74330]
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** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
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** [http://www.uniprot.org/uniprot/P21888 P21888]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cysteinyl-tRNA Synthetase}}
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{{#set: common name=Aminoacyl-tRNA synthetase, class 1a, anticodon-binding}}
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{{#set: common name=Cysteinyl-tRNA synthetase/mycothiol ligase}}
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{{#set: ec number=EC-6.1.1.16}}
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{{#set: gene associated=Ec-10_004180|Ec-02_002270|Ec-12_001440}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:16, 21 March 2018

Gene Ec-01_001660

  • left end position:
    • 1339138
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1378030
  • centisome position:
    • 12.977609
  • Synonym(s):
    • Esi_0112_0034
    • Esi0112_0034

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_001660&oldid=25708"