Difference between revisions of "RXN-9535"

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(Created page with "Category:Gene == Gene Ec-07_003480 == * left end position: ** 3567375 * transcription direction: ** POSITIVE * right end position: ** 3575703 * centisome position: ** 46.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-prote...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_003480 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] ==
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* left end position:
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* direction:
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** 3567375
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* right end position:
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** Beta-ketoacyl synthase, N-terminal
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** 3575703
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** Thiolase-like, subgroup
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* centisome position:
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** beta-ketoacyl synthase, partial
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** 46.19498   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0046_0125
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** β-ketoacyl-ACP synthase I
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** Esi0046_0125
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** β-ketoacyl-acyl carrier protein synthetase
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** putative ATCase
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** β-ketoacyl-[acyl carrier protein] synthase
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** condensing enzyme
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** β-ketoacyl acyl carrier protein synthase
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[ASPCARBTRANS-RXN]]
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* With identifiers:
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** 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 a dodecanoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_000650]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Assignment: GO-TERM
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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== Pathways associated ==
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** Source: [[orthology-aragem]]
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* [[PWY-5686]]
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-12_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3567375}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: right end position=3575703}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: centisome position=46.19498    }}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: common name=Esi_0046_0125|Esi0046_0125|putative ATCase}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: reaction associated=ASPCARBTRANS-RXN}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: pathway associated=PWY-5686}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: common name=β-ketoacyl-ACP synthase I|β-ketoacyl-acyl carrier protein synthetase|β-ketoacyl-[acyl carrier protein] synthase|condensing enzyme|β-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)}}
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{{#set: gene associated=Ec-12_000650|Ec-27_003480|Ec-27_002090|Ec-12_000640}}
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{{#set: in pathway=PWY-5971}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:17, 21 March 2018

Reaction RXN-9535

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
  • ec number:
  • Synonym(s):
    • β-ketoacyl-ACP synthase I
    • β-ketoacyl-acyl carrier protein synthetase
    • β-ketoacyl-[acyl carrier protein] synthase
    • condensing enzyme
    • β-ketoacyl acyl carrier protein synthase
    • 3-oxoacyl-[acyl-carrier-protein] synthase
    • acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




  • "β-ketoacyl-[acyl carrier protein] synthase" cannot be used as a page name in this wiki.
  • "3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.
  • "acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)" cannot be used as a page name in this wiki.



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