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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915] == |
| − | * direction: | + | * taxonomic range: |
| − | ** LEFT-TO-RIGHT | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117] |
| | * common name: | | * common name: |
| − | ** 3-oxoacyl-[acyl-carrier-protein] synthase | + | ** phycoerythrobilin biosynthesis I |
| − | ** Beta-ketoacyl synthase, N-terminal
| + | |
| − | ** Thiolase-like, subgroup
| + | |
| − | ** beta-ketoacyl synthase, partial
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| − | ** β-ketoacyl-ACP synthase I
| |
| − | ** β-ketoacyl-acyl carrier protein synthetase
| |
| − | ** β-ketoacyl-[acyl carrier protein] synthase
| |
| − | ** condensing enzyme
| |
| − | ** β-ketoacyl acyl carrier protein synthase
| |
| − | ** 3-oxoacyl-[acyl-carrier-protein] synthase
| |
| − | ** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
| |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''1''' reactions found over '''4''' reactions in the full pathway |
| − | ** 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
| + | * [[1.3.7.3-RXN]] |
| − | * With common name(s): | + | ** 1 associated gene(s): |
| − | ** 1 a dodecanoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
| + | *** [[Ec-22_000060]] |
| − | | + | ** 1 reconstruction source(s) associated: |
| − | == Genes associated with this reaction ==
| + | *** [[annotation-esiliculosus_genome]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | == Reaction(s) not found == |
| − | * Gene: [[Ec-12_000650]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.2-RXN 1.3.7.2-RXN] |
| − | ** Source: [[annotation-esiliculosus_genome]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-15985 RXN-15985] |
| − | *** Assignment: GO-TERM | + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | * Gene: [[Ec-27_003480]]
| + | |
| − | ** Source: [[annotation-esiliculosus_genome]] | + | |
| − | *** Assignment: EC-NUMBER | + | |
| − | * Gene: [[Ec-27_002090]]
| + | |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | * Gene: [[Ec-12_000640]]
| + | |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971] | + | |
| − | ** '''28''' reactions found over '''31''' reactions in the full pathway | + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | *** Tool: [[pantograph]] | + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: taxonomic range=TAX-1117}} |
| − | {{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}} | + | {{#set: common name=phycoerythrobilin biosynthesis I}} |
| − | {{#set: common name=Beta-ketoacyl synthase, N-terminal}} | + | {{#set: reaction found=1}} |
| − | {{#set: common name=Thiolase-like, subgroup}}
| + | {{#set: total reaction=4}} |
| − | {{#set: common name=beta-ketoacyl synthase, partial}}
| + | {{#set: completion rate=25.0}} |
| − | {{#set: ec number=EC-2.3.1.86}}
| + | |
| − | {{#set: ec number=EC-2.3.1.85}} | + | |
| − | {{#set: ec number=EC-2.3.1.41}} | + | |
| − | {{#set: common name=β-ketoacyl-ACP synthase I|β-ketoacyl-acyl carrier protein synthetase|β-ketoacyl-[acyl carrier protein] synthase|condensing enzyme|β-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)}}
| + | |
| − | {{#set: gene associated=Ec-12_000650|Ec-27_003480|Ec-27_002090|Ec-12_000640}}
| + | |
| − | {{#set: in pathway=PWY-5971}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
