Difference between revisions of "Ec-01 003960"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Gene == Gene Ec-01_003960 == * left end position: ** 3306866 * transcription direction: ** POSITIVE * right end position: ** 3310854 * centisome position: ** 32.0...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Gene]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] ==
+
== Gene Ec-01_003960 ==
−
* taxonomic range:
+
* left end position:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** 3306866
−
* common name:
+
* transcription direction:
−
** 2-methylbutanoate biosynthesis
+
** POSITIVE
 +
* right end position:
 +
** 3310854
 +
* centisome position:
 +
** 32.046898   
 
* Synonym(s):
 
* Synonym(s):
−
** 2-methylbutyrate biosynthesis
+
** Esi_0003_0345
 +
** Esi0003_0345
 +
** GPAT
  
−
== Reaction(s) found ==
+
== Reactions associated ==
−
'''4''' reactions found over '''6''' reactions in the full pathway
+
* Reaction: [[RXN-10462]]
−
* [[1.1.1.178-RXN]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 0 associated gene:
+
*** Assignment: ec-number
−
** 1 reconstruction source(s) associated:
+
* Reaction: [[RXN-13805]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[2-METHYLACYL-COA-DEHYDROGENASE-RXN]]
+
*** Assignment: ec-number
−
** 0 associated gene:
+
* Reaction: [[RXN-1381]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: ec-number
−
* [[METHYLACETOACETYLCOATHIOL-RXN]]
+
* Reaction: [[RXN-15045]]
−
** 3 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-26_003940]]
+
*** Assignment: ec-number
−
*** [[Ec-22_002850]]
+
* Reaction: [[RXN-16024]]
−
*** [[Ec-24_000870]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 2 reconstruction source(s) associated:
+
*** Assignment: ec-number
−
*** [[annotation-esiliculosus_genome]]
+
* Reaction: [[RXN-16117]]
−
*** [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[TIGLYLCOA-HYDROXY-RXN]]
+
*** Assignment: ec-number
−
** 5 associated gene(s):
+
* Reaction: [[RXN-17016]]
−
*** [[Ec-16_003560]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-16_001250]]
+
*** Assignment: ec-number
−
*** [[Ec-06_001380]]
+
* Reaction: [[RXN-17017]]
−
*** [[Ec-14_006530]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-17_000320]]
+
*** Assignment: ec-number
−
** 2 reconstruction source(s) associated:
+
* Reaction: [[RXN-17018]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: ec-number
−
== Reaction(s) not found ==
+
== Pathways associated ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=PROPIONATE-COA-TRANSFERASE-RXN PROPIONATE-COA-TRANSFERASE-RXN]
+
* [[TRIGLSYN-PWY]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15031 RXN-15031]
+
* [[PWY-5667]]
 +
* [[PWY0-1319]]
 +
* [[PWY-7411]]
 +
* [[PWY-7587]]
 +
* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33208}}
+
{{#set: left end position=3306866}}
−
{{#set: common name=2-methylbutanoate biosynthesis}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=2-methylbutyrate biosynthesis}}
+
{{#set: right end position=3310854}}
−
{{#set: reaction found=4}}
+
{{#set: centisome position=32.046898    }}
−
{{#set: total reaction=6}}
+
{{#set: common name=Esi_0003_0345|Esi0003_0345|GPAT}}
−
{{#set: completion rate=67.0}}
+
{{#set: reaction associated=RXN-10462|RXN-13805|RXN-1381|RXN-15045|RXN-16024|RXN-16117|RXN-17016|RXN-17017|RXN-17018}}
 +
{{#set: pathway associated=TRIGLSYN-PWY|PWY-5667|PWY0-1319|PWY-7411|PWY-7587|PWY-6453}}

Latest revision as of 19:20, 21 March 2018

Gene Ec-01_003960

  • left end position:
    • 3306866
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3310854
  • centisome position:
    • 32.046898
  • Synonym(s):
    • Esi_0003_0345
    • Esi0003_0345
    • GPAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_003960&oldid=26193"