Difference between revisions of "DIHYDROXYISOVALDEHYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA(Ile)-lysidine/2-thiocyti...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYISOVALDEHYDRAT-RXN DIHYDROXYISOVALDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** tRNA(Ile)-lysidine/2-thiocytidine synthase
+
** Dihydroxy-acid/6-phosphogluconate dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.19 EC-6.3.4.19]
+
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Cytidine-34-tRNAIle2]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''=>''' 1 [[Lysidine-tRNA-Ile2]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[CPD-13357]][c] '''=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a cytidine34 in tRNAIle2[c] '''+''' 1 ATP[c] '''+''' 1 L-lysine[c] '''=>''' 1 a lysidine34 in tRNAIle2[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 AMP[c]
+
** 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''=>''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-00_002670]]
+
* Gene: [[Ec-03_000220]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R09597 R09597]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04441 R04441]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P55186 P55186]
 +
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
 +
** [http://www.uniprot.org/uniprot/P05791 P05791]
 +
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
 +
** [http://www.uniprot.org/uniprot/P44851 P44851]
 +
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
 +
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
 +
** [http://www.uniprot.org/uniprot/P39522 P39522]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=tRNA(Ile)-lysidine/2-thiocytidine synthase}}
+
{{#set: common name=Dihydroxy-acid/6-phosphogluconate dehydratase}}
−
{{#set: ec number=EC-6.3.4.19}}
+
{{#set: ec number=EC-4.2.1.9}}
−
{{#set: gene associated=Ec-00_002670}}
+
{{#set: gene associated=Ec-03_000220}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=VALSYN-PWY|PWY-7111}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:21, 21 March 2018

Reaction DIHYDROXYISOVALDEHYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Dihydroxy-acid/6-phosphogluconate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] => 1 3-methyl-2-oxobutanoate[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALSYN-PWY, L-valine biosynthesis: VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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