Difference between revisions of "RXN-9003"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14219 RXN-14219] == * direction: ** LEFT-TO-RIGHT * common name: ** Apyrase * Synonym(s): == R...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate nonaprenylt...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** 4-hydroxybenzoate nonaprenyltransferase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[ALL-TRANS-HEXAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[3-HEXAPRENYL-4-HYDROXYBENZOATE]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-hexaprenyl diphosphate[c] '''=>''' 1 3-hexaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[Ec- | + | * Gene: [[Ec-00_007360]] |
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Ec-17_003520]] | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | * Gene: [[Ec-24_003910]] | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | * Gene: [[Ec-27_002140]] | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | * Gene: [[Ec-08_002270]] | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | * Gene: [[Ec-18_000990]] | ||
| + | ** Source: [[orthology-aragem]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19] | ||
| + | ** '''1''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-7235]], superpathway of ubiquinol-6 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7235 PWY-7235] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=4-hydroxybenzoate nonaprenyltransferase}} |
| − | {{#set: gene associated=Ec- | + | {{#set: ec number=EC-2.5.1.39}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=Ec-00_007360|Ec-17_003520|Ec-24_003910|Ec-27_002140|Ec-08_002270|Ec-18_000990}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: in pathway=PWY3O-19|PWY-7235}} |
| − | {{#set: reconstruction source=annotation-esiliculosus_genome}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:21, 21 March 2018
Contents
Reaction RXN-9003
- direction:
- LEFT-TO-RIGHT
- common name:
- 4-hydroxybenzoate nonaprenyltransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 4-hydroxybenzoate[c] + 1 ALL-TRANS-HEXAPRENYL-DIPHOSPHATE[c] => 1 3-HEXAPRENYL-4-HYDROXYBENZOATE[c] + 1 PPI[c]
- With common name(s):
- 1 4-hydroxybenzoate[c] + 1 all-trans-hexaprenyl diphosphate[c] => 1 3-hexaprenyl-4-hydroxybenzoate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-00_007360
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
- Gene: Ec-17_003520
- Source: orthology-aragem
- Gene: Ec-24_003910
- Source: orthology-aragem
- Gene: Ec-27_002140
- Source: orthology-aragem
- Gene: Ec-08_002270
- Source: orthology-aragem
- Gene: Ec-18_000990
- Source: orthology-aragem
Pathways
- PWY3O-19, ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): PWY3O-19
- 1 reactions found over 8 reactions in the full pathway
- PWY-7235, superpathway of ubiquinol-6 biosynthesis (eukaryotic): PWY-7235
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- LIGAND-RXN:
