Difference between revisions of "Ec-17 000840"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11479 RXN-11479] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
(Created page with "Category:Gene == Gene Ec-17_000840 == * left end position: ** 749485 * transcription direction: ** NEGATIVE * right end position: ** 772390 * centisome position: ** 15.620...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11479 RXN-11479] ==
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== Gene Ec-17_000840 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 749485
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* common name:
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* transcription direction:
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** Beta-ketoacyl synthase, N-terminal
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** NEGATIVE
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** beta-ketoacyl synthase, partial
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* right end position:
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** Thiolase-like, subgroup
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** 772390
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* centisome position:
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* ec number:
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** 15.620952   
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0016_0108
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** Esi0016_0108
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.67-RXN]]
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** 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[ALPHAGALACTOSID-RXN]]
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** 1 a glutaryl-[acp] methyl ester[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-pimeloyl-[acp] methyl ester[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_000650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Ec-12_000640]]
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* Reaction: [[RXN-11501]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-12088]]
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6527]]
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* [[PWY0-1301]]
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* [[PWY-5337]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=749485}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: right end position=772390}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: centisome position=15.620952    }}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: common name=Esi_0016_0108|Esi0016_0108}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: reaction associated=2.4.1.67-RXN|ALPHAGALACTOSID-RXN|RXN-11501|RXN-12088}}
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{{#set: gene associated=Ec-12_000650|Ec-27_003480|Ec-27_002090|Ec-12_000640}}
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{{#set: pathway associated=PWY-6527|PWY0-1301|PWY-5337}}
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{{#set: in pathway=PWY-6519}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:21, 21 March 2018

Gene Ec-17_000840

  • left end position:
    • 749485
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 772390
  • centisome position:
    • 15.620952
  • Synonym(s):
    • Esi_0016_0108
    • Esi0016_0108

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_000840&oldid=26394"