Difference between revisions of "ASPARAGHYD-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Asparaginase/glut...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** pyrimidine deoxyribonucleotides de novo biosynthesis II
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** Asparaginase/glutaminase
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** Peptidase T2, asparaginase 2
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
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** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[DTDPKIN-RXN]]
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** 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[AMMONIUM]][c]
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** 7 associated gene(s):
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* With common name(s):
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*** [[Ec-26_003930]]
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** 1 L-asparagine[c] '''+''' 1 H2O[c] '''=>''' 1 L-aspartate[c] '''+''' 1 ammonium[c]
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*** [[Ec-07_000140]]
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*** [[Ec-03_001380]]
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== Genes associated with this reaction  ==
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*** [[Ec-22_003280]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-04_001140]]
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* Gene: [[Ec-11_002360]]
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*** [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-11_005170]]
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*** Assignment: EC-NUMBER
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-27_003980]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: EC-NUMBER
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* [[DTMPKI-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY]
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*** [[Ec-20_004950]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY]
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*** [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[DUTP-PYROP-RXN]]
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* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
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** 1 associated gene(s):
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[Ec-13_002810]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Tool: [[pathwaytools]]
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* [[RXN0-723]]
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** 1 associated gene(s):
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*** [[Ec-04_006460]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN0-724]]
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** 1 associated gene(s):
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*** [[Ec-04_006460]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_004630]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7187 PWY-7187]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21016 21016]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
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{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis II}}
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* UNIPROT:
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{{#set: reaction found=6}}
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** [http://www.uniprot.org/uniprot/P06608 P06608]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P26900 P26900]
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{{#set: completion rate=86.0}}
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** [http://www.uniprot.org/uniprot/P43843 P43843]
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** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
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** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
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** [http://www.uniprot.org/uniprot/O25424 O25424]
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** [http://www.uniprot.org/uniprot/P37595 P37595]
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** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
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** [http://www.uniprot.org/uniprot/O34482 O34482]
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** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
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** [http://www.uniprot.org/uniprot/O57797 O57797]
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** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
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** [http://www.uniprot.org/uniprot/P30363 P30363]
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** [http://www.uniprot.org/uniprot/P30362 P30362]
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** [http://www.uniprot.org/uniprot/P30364 P30364]
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** [http://www.uniprot.org/uniprot/P38986 P38986]
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** [http://www.uniprot.org/uniprot/P50287 P50287]
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** [http://www.uniprot.org/uniprot/P11163 P11163]
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** [http://www.uniprot.org/uniprot/P50286 P50286]
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** [http://www.uniprot.org/uniprot/P87015 P87015]
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** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
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** [http://www.uniprot.org/uniprot/P00805 P00805]
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** [http://www.uniprot.org/uniprot/P0A962 P0A962]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Asparaginase/glutaminase}}
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{{#set: common name=Peptidase T2, asparaginase 2}}
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{{#set: ec number=EC-3.5.1.38}}
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{{#set: ec number=EC-3.5.1.1}}
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{{#set: gene associated=Ec-11_002360|Ec-27_003980}}
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{{#set: in pathway=ASPASN-PWY|ASPARAGINE-DEG1-PWY|ASPARAGINE-DEG1-PWY-1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:22, 21 March 2018

Reaction ASPARAGHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Asparaginase/glutaminase
    • Peptidase T2, asparaginase 2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-asparagine[c] + 1 H2O[c] => 1 L-aspartate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ASPARAGHYD-RXN&oldid=26409"