Difference between revisions of "PNKIN-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-01_001850 == * Synonym(s): ** Esi_0112_0069 ** Esi0112_0069 == Reactions associated == * Reaction: RXN-8443 ** Source: orthology-aragem =...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxamine kinase * ec nu...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNKIN-RXN PNKIN-RXN] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Pyridoxamine kinase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.7.1.35 EC-2.7.1.35] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[PYRIDOXINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PYRIDOXINE-5P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 pyridoxine[c] '''+''' 1 ATP[c] '''=>''' 1 pyridoxine 5'-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-02_001230]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-aragem]] | ||
| + | == Pathways == | ||
| + | * [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
** Source: [[orthology-aragem]] | ** Source: [[orthology-aragem]] | ||
| − | + | *** Tool: [[pantograph]] | |
| − | * [[ | + | * Category: [[annotation]] |
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25108 25108] |
| − | {{#set: pathway | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Pyridoxamine kinase}} | ||
| + | {{#set: ec number=EC-2.7.1.35}} | ||
| + | {{#set: gene associated=Ec-02_001230}} | ||
| + | {{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:23, 21 March 2018
Contents
Reaction PNKIN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Pyridoxamine kinase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PYRIDOXINE[c] + 1 ATP[c] => 1 PYRIDOXINE-5P[c] + 1 ADP[c] + 1 PROTON[c]
- With common name(s):
- 1 pyridoxine[c] + 1 ATP[c] => 1 pyridoxine 5'-phosphate[c] + 1 ADP[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-02_001230
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
- 5 reactions found over 9 reactions in the full pathway
- PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
- 5 reactions found over 9 reactions in the full pathway
- PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
