Difference between revisions of "RXN-11520"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1501 PWY-1501] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1501 PWY-1501] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
* common name:
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** mandelate degradation I
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* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
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** 1 [[1-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-12483]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
** 0 associated gene:
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* With common name(s):
** 1 reconstruction source(s) associated:
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** 1 paraxanthine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 1,7-dimethylurate[c] '''+''' 1 hydrogen peroxide[c]
*** [[annotation-esiliculosus_genome]]
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* [[BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN]]
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== Genes associated with this reaction  ==
** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
** 1 reconstruction source(s) associated:
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* Gene: [[Ec-20_000230]]
*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
== Reaction(s) not found ==
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* Gene: [[Ec-20_000210]]
* [http://metacyc.org/META/NEW-IMAGE?object=BENZOYLFORMATE-DECARBOXYLASE-RXN BENZOYLFORMATE-DECARBOXYLASE-RXN]
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** Source: [[orthology-aragem]]
* [http://metacyc.org/META/NEW-IMAGE?object=MANDELATE-DEHYDROGENASE-RXN MANDELATE-DEHYDROGENASE-RXN]
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== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=MANDELATE-RACEMASE-RXN MANDELATE-RACEMASE-RXN]
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* UM-BBD-PWY : MCA
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* LIGAND-RXN:
{{#set: taxonomic range=TAX-1224}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
{{#set: common name=mandelate degradation I}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reaction found=2}}
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{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
{{#set: total reaction=5}}
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{{#set: in pathway=PWY-6632}}
{{#set: completion rate=40.0}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:23, 21 March 2018

Reaction RXN-11520

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation): PWY-6632
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links