Difference between revisions of "ALPHAGALACTOSID-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] == * direction: ** LEFT-TO-RIGHT * common name: ** Cystathionine beta-lyase **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-g...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12729 RXN-12729] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALPHAGALACTOSID-RXN ALPHAGALACTOSID-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Cystathionine beta-lyase
+
** Alpha-galactosidase, family GH36
−
** Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.8 EC-4.4.1.8]
+
** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-13717]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SELENOHOMOCYSTEINE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[D-galactopyranose]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 L-selenocystathionine[c] '''=>''' 1 pyruvate[c] '''+''' 1 seleno-L-homocysteine[c] '''+''' 1 ammonium[c]
+
** 1 melibiose[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 D-galactopyranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-00_002820]]
+
* Gene: [[Ec-26_006290]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-05_006760]]
+
* Gene: [[Ec-04_003730]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-17_000840]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
+
* [[PWY0-1301]], melibiose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1301 PWY0-1301]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16551 P16551]
 +
** [http://www.uniprot.org/uniprot/P27756 P27756]
 +
** [http://www.uniprot.org/uniprot/P04824 P04824]
 +
** [http://www.uniprot.org/uniprot/P06720 P06720]
 +
** [http://www.uniprot.org/uniprot/P06280 P06280]
 +
** [http://www.uniprot.org/uniprot/P51569 P51569]
 +
** [http://www.uniprot.org/uniprot/O93816 O93816]
 +
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
 +
** [http://www.uniprot.org/uniprot/P14749 P14749]
 +
** [http://www.uniprot.org/uniprot/P28351 P28351]
 +
** [http://www.uniprot.org/uniprot/P43467 P43467]
 +
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
 +
** [http://www.uniprot.org/uniprot/P41945 P41945]
 +
** [http://www.uniprot.org/uniprot/P41946 P41946]
 +
** [http://www.uniprot.org/uniprot/P41947 P41947]
 +
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
 +
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
 +
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
 +
** [http://www.uniprot.org/uniprot/O04943 O04943]
 +
** [http://www.uniprot.org/uniprot/O04944 O04944]
 +
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
 +
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
 +
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Cystathionine beta-lyase}}
+
{{#set: common name=Alpha-galactosidase, family GH36}}
−
{{#set: common name=Cys/Met metabolism, pyridoxal phosphate-dependent enzyme}}
+
{{#set: ec number=EC-3.2.1.22}}
−
{{#set: ec number=EC-4.4.1.8}}
+
{{#set: gene associated=Ec-26_006290|Ec-04_003730|Ec-17_000840}}
−
{{#set: gene associated=Ec-00_002820|Ec-05_006760}}
+
{{#set: in pathway=PWY0-1301}}
−
{{#set: in pathway=PWY-6936}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:26, 21 March 2018

Reaction ALPHAGALACTOSID-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Alpha-galactosidase, family GH36
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1301, melibiose degradation: PWY0-1301
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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