Difference between revisions of "CPD-12115"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ACT dom...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERDEHYDROG-RXN HOMOSERDEHYDROG-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** ACT domain
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** glycolysis IV (plant cytosol)
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** Homoserine dehydrogenase
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** aspartate kinase/homoserine dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.3 EC-1.1.1.3]
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* Synonym(s):
 
* Synonym(s):
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** glycolysis 4
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''10''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[HOMO-SER]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 L-homoserine[c]
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*** [[Ec-27_004000]]
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*** [[Ec-26_004120]]
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== Genes associated with this reaction  ==
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*** [[Ec-14_005400]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-11_000830]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***AUTOMATED-NAME-MATCH
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* [[3PGAREARR-RXN]]
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* [[Ec-01_005000]]
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** 7 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-24_002670]]
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***EC-NUMBER
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*** [[Ec-03_002170]]
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* [[Ec-11_004120]]
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*** [[Ec-27_000330]]
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** ESILICULOSUS_GENOME
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*** [[Ec-03_002160]]
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***EC-NUMBER
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*** [[Ec-01_000980]]
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== Pathways  ==
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*** [[Ec-06_009930]]
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* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
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*** [[Ec-10_005410]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* [[annotation]]:
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*** [[orthology-aragem]]
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** [[pathwaytools]]:
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* [[6PFRUCTPHOS-RXN]]
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*** [[esiliculosus_genome]]
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** 3 associated gene(s):
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*** [[Ec-12_002540]]
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*** [[Ec-22_000070]]
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*** [[Ec-14_003880]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_000880]]
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*** [[Ec-10_004980]]
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*** [[Ec-14_001680]]
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*** [[Ec-01_008040]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-25_003550]]
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*** [[Ec-19_001850]]
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*** [[Ec-19_003020]]
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*** [[Ec-08_000500]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-12_000950]]
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*** [[Ec-06_006860]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-01_001350]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Ec-08_000500]]
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*** [[Ec-23_004160]]
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*** [[Ec-03_002790]]
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*** [[Ec-24_000360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.9-RXN 1.2.1.9-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.90-RXN 2.7.1.90-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R01773 R01773]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1042 PWY-1042]
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** [http://www.genome.jp/dbget-bin/www_bget?R01775 R01775]
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{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
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{{#set: common name=glycolysis IV (plant cytosol)}}
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** [http://www.uniprot.org/uniprot/P44505 P44505]
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{{#set: common name=glycolysis 4}}
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** [http://www.uniprot.org/uniprot/Q58997 Q58997]
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{{#set: reaction found=8}}
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** [http://www.uniprot.org/uniprot/P27725 P27725]
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{{#set: total reaction=10}}
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** [http://www.uniprot.org/uniprot/O67677 O67677]
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{{#set: completion rate=80.0}}
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** [http://www.uniprot.org/uniprot/P19582 P19582]
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** [http://www.uniprot.org/uniprot/P00561 P00561]
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** [http://www.uniprot.org/uniprot/P00562 P00562]
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** [http://www.uniprot.org/uniprot/P08499 P08499]
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** [http://www.uniprot.org/uniprot/Q9JR84 Q9JR84]
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** [http://www.uniprot.org/uniprot/Q9PIX8 Q9PIX8]
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** [http://www.uniprot.org/uniprot/P56429 P56429]
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** [http://www.uniprot.org/uniprot/O27300 O27300]
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** [http://www.uniprot.org/uniprot/Q9CGD8 Q9CGD8]
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** [http://www.uniprot.org/uniprot/P52985 P52985]
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** [http://www.uniprot.org/uniprot/P31116 P31116]
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** [http://www.uniprot.org/uniprot/P37142 P37142]
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** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
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** [http://www.uniprot.org/uniprot/P52986 P52986]
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** [http://www.uniprot.org/uniprot/P49079 P49079]
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** [http://www.uniprot.org/uniprot/P49080 P49080]
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** [http://www.uniprot.org/uniprot/P93402 P93402]
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** [http://www.uniprot.org/uniprot/O81852 O81852]
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** [http://www.uniprot.org/uniprot/O63067 O63067]
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** [http://www.uniprot.org/uniprot/O65027 O65027]
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** [http://www.uniprot.org/uniprot/P46806 P46806]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ACT domain}}
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{{#set: common name=Homoserine dehydrogenase}}
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{{#set: common name=aspartate kinase/homoserine dehydrogenase}}
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{{#set: ec number=EC-1.1.1.3}}
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{{#set: gene associated=Ec-11_000830|Ec-01_005000|Ec-11_004120}}
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{{#set: in pathway=HOMOSERSYN-PWY}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:50, 17 March 2018

Pathway PWY-1042

  • taxonomic range:
  • common name:
    • glycolysis IV (plant cytosol)
  • Synonym(s):
    • glycolysis 4

Reaction(s) found

8 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-12115&oldid=10549"