Difference between revisions of "4.2.1.61-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] == * direction: ** REVERSIBLE * common nam...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** 1,3-beta-glucan synthase, family GT48
+
−
** 1,3-beta-D-glucan synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.34 EC-2.4.1.34]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
 +
** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
 +
** β-hydroxypalmitoyl-acyl carrier protein dehydrase
 +
** β-hydroxypalmitoyl thioester dehydratase
 +
** β-hydroxypalmityl-ACP dehydrase
 +
** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
 +
** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[CPD-12575]][c] '''<=>''' 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[UDP]][c]
+
** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-Hexadecenoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,3-&beta;-D-glucan[c] '''+''' 1 UDP-&alpha;-D-glucose[c] '''<=>''' 1 a 1,3-&beta;-D-glucan[c] '''+''' 1 UDP[c]
+
** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a trans hexadecenoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-00_000820]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-08_004800]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Ec-12_000870]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Ec-08_004910]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-08_004920]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[Ec-28_002440]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6773]], 1,3-&beta;-D-glucan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6773 PWY-6773]
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''28''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''20''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03118 R03118]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P38631 P38631]
+
** [http://www.uniprot.org/uniprot/P49327 P49327]
−
** [http://www.uniprot.org/uniprot/P40989 P40989]
+
** [http://www.uniprot.org/uniprot/P07149 P07149]
−
** [http://www.uniprot.org/uniprot/Q10287 Q10287]
+
** [http://www.uniprot.org/uniprot/P12276 P12276]
−
** [http://www.uniprot.org/uniprot/P38678 P38678]
+
** [http://www.uniprot.org/uniprot/P12785 P12785]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1,3-beta-glucan synthase, family GT48}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: common name=1,3-beta-D-glucan synthase}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: ec number=EC-2.4.1.34}}
+
{{#set: ec number=EC-4.2.1.59}}
−
{{#set: gene associated=Ec-00_000820|Ec-08_004800|Ec-12_000870|Ec-08_004910|Ec-08_004920|Ec-28_002440}}
+
{{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|&beta;-hydroxypalmitoyl-acyl carrier protein dehydrase|&beta;-hydroxypalmitoyl thioester dehydratase|&beta;-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
−
{{#set: in pathway=PWY-6773}}
+
{{#set: in pathway=PWY-5971|PWY-5994}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 19:27, 21 March 2018

Reaction 4.2.1.61-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):
    • D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
    • β-hydroxypalmitoyl-acyl carrier protein dehydrase
    • β-hydroxypalmitoyl thioester dehydratase
    • β-hydroxypalmityl-ACP dehydrase
    • (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
    • (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links



  • "D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase" cannot be used as a page name in this wiki.
  • "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase" cannot be used as a page name in this wiki.
  • "(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)" cannot be used as a page name in this wiki.



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