Difference between revisions of "RXN-16134"

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(Created page with "Category:Gene == Gene Ec-01_005220 == * left end position: ** 4497052 * transcription direction: ** POSITIVE * right end position: ** 4501486 * centisome position: ** 43.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA oxidase/dehydrogen...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-01_005220 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] ==
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* left end position:
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* direction:
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** 4497052
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Acyl-CoA oxidase/dehydrogenase, central domain
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* right end position:
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** acyl-CoA oxidase, partial
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** 4501486
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** acyl-CoA oxidase
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* centisome position:
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* ec number:
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** 43.58101   
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0018_0080
 
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** Esi0018_0080
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[RIBOKIN-RXN]]
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* With identifiers:
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** 1 [[CPD-17385]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-17386]][c]
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* With common name(s):
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** 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-08_006390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-26_004320]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-22_002920]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN-14223]]
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== Pathways  ==
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[RIBOKIN-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=4497052}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: right end position=4501486}}
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{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: centisome position=43.58101    }}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: common name=Esi_0018_0080|Esi0018_0080}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: reaction associated=RIBOKIN-RXN|RXN-14223}}
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{{#set: gene associated=Ec-08_006390|Ec-26_004320|Ec-22_002920}}
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{{#set: pathway associated=RIBOKIN-PWY}}
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{{#set: in pathway=PWY-7606}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:27, 21 March 2018

Reaction RXN-16134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acyl-CoA oxidase/dehydrogenase, central domain
    • acyl-CoA oxidase, partial
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 oxygen[c] => 1 hydrogen peroxide[c] + 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16134&oldid=27033"