Difference between revisions of "GLYOXIII-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonuclease P ** Ribonucle...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXIII-RXN GLYOXIII-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glyoxalase/Bleomycin...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXIII-RXN GLYOXIII-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ribonuclease P
+
** Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
−
** Ribonuclease P, Rpp40
+
** Glyoxalase/fosfomycin resistance/dioxygenase domain
−
** RNAse P, Rpr2/Rpp21 subunit
+
** glyoxalase domain containing protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
+
** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD0-2354]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[tRNA-fragment]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[METHYL-GLYOXAL]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[D-LACTATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNA precursor with a 5' extension[c] '''+''' 1 H2O[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 a tRNA fragment[c]
+
** 1 H2O[c] '''+''' 1 methylglyoxal[c] '''=>''' 1 H+[c] '''+''' 1 (R)-lactate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-03_005340]]
+
* Gene: [[Ec-24_000860]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-04_004570]]
+
* Gene: [[Ec-18_000790]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-22_001370]]
+
* Gene: [[Ec-02_005280]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-01_005810]]
+
* Gene: [[Ec-11_004780]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-23_003630]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-23_001400]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_004210]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_008210]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-27_005140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-01_004500]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_005270]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_005420]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-19_002580]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_002530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_005260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 39: Line 70:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27754 27754]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ribonuclease P}}
+
{{#set: common name=Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase}}
−
{{#set: common name=Ribonuclease P, Rpp40}}
+
{{#set: common name=Glyoxalase/fosfomycin resistance/dioxygenase domain}}
−
{{#set: common name=RNAse P, Rpr2/Rpp21 subunit}}
+
{{#set: common name=glyoxalase domain containing protein}}
−
{{#set: ec number=EC-3.1.26.5}}
+
{{#set: ec number=EC-4.2.1}}
−
{{#set: gene associated=Ec-03_005340|Ec-04_004570|Ec-22_001370|Ec-01_005810}}
+
{{#set: gene associated=Ec-24_000860|Ec-18_000790|Ec-02_005280|Ec-11_004780|Ec-23_003630|Ec-23_001400|Ec-14_004210|Ec-06_008210|Ec-27_005140|Ec-01_004500|Ec-02_005270|Ec-02_005420|Ec-19_002580|Ec-06_002530|Ec-02_005260}}
−
{{#set: in pathway=PWY0-1479}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:28, 21 March 2018

Reaction GLYOXIII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
    • Glyoxalase/fosfomycin resistance/dioxygenase domain
    • glyoxalase domain containing protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=GLYOXIII-RXN&oldid=27098"