Difference between revisions of "2.5.1.41-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.41-RXN 2.5.1.41-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Prenyltransferase/squ...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.41-RXN 2.5.1.41-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* common name:
 
* common name:
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** docosahexaenoate biosynthesis III (6-desaturase, mammals)
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** Prenyltransferase/squalene oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.41 EC-2.5.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''14''' reactions found over '''14''' reactions in the full pathway
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* With identifiers:
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* [[RXN-13442]]
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** 1 [[SN-GLYCEROL-1-PHOSPHATE]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[SN-GERANYLGERANYLGLYCERYL-1-PHOSPHATE]][c] '''+''' 1 [[PPI]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 sn-glycerol 1-phosphate[c] '''+''' 1 geranylgeranyl diphosphate[c] '''=>''' 1 3-(O-geranylgeranyl)-sn-glycerol 1-phosphate[c] '''+''' 1 diphosphate[c]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-13443]]
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== Genes associated with this reaction  ==
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** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-07_006170]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-13444]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 0 associated gene:
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-6349]], CDP-archaeol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6349 PWY-6349]
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*** [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-13445]]
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== Reconstruction information  ==
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** 0 associated gene:
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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* [[RXN-16082]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16103]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16129]]
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−
** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-16130]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-16131]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16132]]
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** 1 associated gene(s):
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*** [[Ec-24_002300]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16134]]
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** 3 associated gene(s):
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*** [[Ec-08_006390]]
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*** [[Ec-26_004320]]
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*** [[Ec-22_002920]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-16135]]
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−
** 4 associated gene(s):
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−
*** [[Ec-16_003560]]
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*** [[Ec-14_006530]]
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*** [[Ec-06_001380]]
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*** [[Ec-16_001250]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16136]]
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−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-16137]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23404 23404]
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{{#set: common name=docosahexaenoate biosynthesis III (6-desaturase, mammals)}}
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* LIGAND-RXN:
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{{#set: reaction found=14}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04158 R04158]
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{{#set: total reaction=14}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=100.0}}
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{{#set: common name=Prenyltransferase/squalene oxidase}}
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{{#set: ec number=EC-2.5.1.41}}
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{{#set: gene associated=Ec-07_006170}}
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{{#set: in pathway=PWY-6349}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:28, 21 March 2018

Reaction 2.5.1.41-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Prenyltransferase/squalene oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6349, CDP-archaeol biosynthesis: PWY-6349
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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