Difference between revisions of "PWY3DJ-35471"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9655 RXN-9655] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-774...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9655 RXN-9655] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** L-ascorbate biosynthesis IV
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
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** (3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
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** vitamin C biosynthesis
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** β-hydroxyacyl-ACP dehydrase
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** L-ascorbic acid biosynthesis IV
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** HDDase
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** β-hydroxyacyl-acyl carrier protein dehydratase
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** FabA
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** β-hydroxydecanoyl thiol ester dehydrase
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** β-hydroxydecanoate dehydrase
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** D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''6''' reactions in the full pathway
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** 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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* [[RXN-14693]]
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* With common name(s):
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** 0 associated gene:
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** 1 a (3R)-3-hydroxydecanoyl-[acp][c] '''=>''' 1 a (2E)-dec-2-enoyl-[acp][c] '''+''' 1 H2O[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[RXN-8783]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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*** [[Ec-21_001990]]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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*** [[Ec-10_002500]]
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** 1 reconstruction source(s) associated:
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** '''20''' reactions found over '''31''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
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== Reaction(s) not found ==
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCURONATE-REDUCTASE-RXN GLUCURONATE-REDUCTASE-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=L-GULONOLACTONE-OXIDASE-RXN L-GULONOLACTONE-OXIDASE-RXN]
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* Category: [[gap-filling]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8784 RXN-8784]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3DJ-64 RXN3DJ-64]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-7742}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: common name=L-ascorbate biosynthesis IV}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: common name=vitamin C biosynthesis|L-ascorbic acid biosynthesis IV}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: reaction found=2}}
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{{#set: common name=(3R)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase|β-hydroxyacyl-ACP dehydrase|HDDase|β-hydroxyacyl-acyl carrier protein dehydratase|FabA|β-hydroxydecanoyl thiol ester dehydrase|β-hydroxydecanoate dehydrase|D-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase}}
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{{#set: total reaction=6}}
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{{#set: in pathway=PWY-5971|PWY-5994|PWY0-862}}
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{{#set: completion rate=33.0}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 19:28, 21 March 2018

Pathway PWY3DJ-35471

  • taxonomic range:
  • common name:
    • L-ascorbate biosynthesis IV
  • Synonym(s):
    • vitamin C biosynthesis
    • L-ascorbic acid biosynthesis IV

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY3DJ-35471&oldid=27159"