Difference between revisions of "RXN0-5114"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] == * direction: ** LEFT-TO-RIGHT * common name: ** GA12-aldehyde monooxygenase...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] == * direction: ** LEFT-TO-RIGHT * common name: ** HAD-like domain * ec number...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** HAD-like domain |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[3-P-SERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SER]][c] '''+''' 1 [[Pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 3-phospho-L-serine[c] '''+''' 1 H2O[c] '''=>''' 1 L-serine[c] '''+''' 1 phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[Ec- | + | * Gene: [[Ec-18_001570]] |
| − | ** Source: [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | * | + | *** Assignment: EC-NUMBER |
| − | ** | + | |
| − | + | ||
** Source: [[orthology-aragem]] | ** Source: [[orthology-aragem]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY] |
| − | ** '''3''' reactions found over | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-aragem]] | ** Source: [[orthology-aragem]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582] |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=HAD-like domain}} |
| − | {{#set: gene associated=Ec- | + | {{#set: ec number=EC-3.1.3.3}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=Ec-18_001570}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=SERSYN-PWY}} |
| − | {{#set: reconstruction source=orthology-aragem}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:30, 21 March 2018
Contents
Reaction RXN0-5114
- direction:
- LEFT-TO-RIGHT
- common name:
- HAD-like domain
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 3-P-SERINE[c] + 1 WATER[c] => 1 SER[c] + 1 Pi[c]
- With common name(s):
- 1 3-phospho-L-serine[c] + 1 H2O[c] => 1 L-serine[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-18_001570
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
