Difference between revisions of "RXN0-5114"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] == * direction: ** LEFT-TO-RIGHT * common name: ** GA12-aldehyde monooxygenase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] == * direction: ** LEFT-TO-RIGHT * common name: ** HAD-like domain * ec number...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** GA12-aldehyde monooxygenase
+
** HAD-like domain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD1F-138]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-95]][c]
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** 1 [[3-P-SERINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SER]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 gibberellin A12-aldehyde[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 gibberellin A12[c]
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** 1 3-phospho-L-serine[c] '''+''' 1 H2O[c] '''=>''' 1 L-serine[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[Ec-00_005820]]
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* Gene: [[Ec-18_001570]]
** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
* Gene: [[Ec-10_006240]]
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*** Assignment: EC-NUMBER
** Source: [[orthology-aragem]]
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* Gene: [[Ec-00_005850]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22700 22700]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R06297 R06297]
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** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=GA12-aldehyde monooxygenase}}
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{{#set: common name=HAD-like domain}}
{{#set: gene associated=Ec-00_005820|Ec-10_006240|Ec-00_005850}}
+
{{#set: ec number=EC-3.1.3.3}}
{{#set: in pathway=PWY-5047|PWY-5034}}
+
{{#set: gene associated=Ec-18_001570}}
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=SERSYN-PWY}}
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:30, 21 March 2018

Reaction RXN0-5114

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • HAD-like domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-phospho-L-serine[c] + 1 H2O[c] => 1 L-serine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links