Difference between revisions of "IMP-DEHYDROG-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** IMP dehydrogenas...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] ==
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* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** REVERSIBLE
 
* common name:
 
* common name:
−
** adenosine nucleotides degradation I
+
** IMP dehydrogenase/GMP reductase
 +
** IMP dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.205 EC-1.1.1.205]
 
* Synonym(s):
 
* Synonym(s):
−
** purine nucleotide catabolism
 
  
−
== Reaction(s) found ==
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== Reaction Formula ==
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'''6''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
−
* [[AMP-DEAMINASE-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** 2 associated gene(s):
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* With common name(s):
−
*** [[Ec-04_006560]]
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** 1 NAD+[c] '''+''' 1 IMP[c] '''+''' 1 H2O[c] '''<=>''' 1 XMP[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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*** [[Ec-00_010560]]
+
 
−
** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[IMP-DEHYDROG-RXN]]
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* Gene: [[Ec-24_002410]]
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** 2 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-24_002410]]
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*** Assignment: GO-TERM
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*** [[Ec-19_000030]]
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** Source: [[orthology-aragem]]
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-19_000030]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[RXN-7607]]
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** Source: [[orthology-aragem]]
−
** 3 associated gene(s):
+
== Pathways  ==
−
*** [[Ec-12_005060]]
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* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
−
*** [[Ec-15_000820]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-05_000950]]
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* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
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** 1 reconstruction source(s) associated:
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** '''3''' reactions found over '''4''' reactions in the full pathway
−
*** [[annotation-esiliculosus_genome]]
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
−
* [[RXN-7682]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
−
** 2 associated gene(s):
+
== Reconstruction information  ==
−
*** [[Ec-20_000210]]
+
* Category: [[orthology]]
−
*** [[Ec-20_000230]]
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** Source: [[orthology-aragem]]
−
** 2 reconstruction source(s) associated:
+
*** Tool: [[pantograph]]
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN0-901]]
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*** Tool: [[pathwaytools]]
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** 2 associated gene(s):
+
−
*** [[Ec-20_000230]]
+
−
*** [[Ec-20_000210]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[XMPXAN-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Ec-05_000950]]
+
−
*** [[Ec-15_000820]]
+
−
*** [[Ec-12_005060]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=INOSINE-NUCLEOSIDASE-RXN INOSINE-NUCLEOSIDASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-3193}}
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* RHEA:
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{{#set: common name=adenosine nucleotides degradation I}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11708 11708]
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{{#set: common name=purine nucleotide catabolism}}
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* LIGAND-RXN:
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{{#set: reaction found=6}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01130 R01130]
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{{#set: total reaction=8}}
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* UNIPROT:
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{{#set: completion rate=75.0}}
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** [http://www.uniprot.org/uniprot/P12268 P12268]
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** [http://www.uniprot.org/uniprot/P21620 P21620]
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** [http://www.uniprot.org/uniprot/P50098 P50098]
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** [http://www.uniprot.org/uniprot/P50097 P50097]
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** [http://www.uniprot.org/uniprot/O26245 O26245]
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** [http://www.uniprot.org/uniprot/Q9PAR5 Q9PAR5]
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** [http://www.uniprot.org/uniprot/P65172 P65172]
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** [http://www.uniprot.org/uniprot/Q9X168 Q9X168]
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** [http://www.uniprot.org/uniprot/Q9KTW3 Q9KTW3]
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** [http://www.uniprot.org/uniprot/Q9YBU2 Q9YBU2]
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** [http://www.uniprot.org/uniprot/Q9CIY6 Q9CIY6]
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** [http://www.uniprot.org/uniprot/P21879 P21879]
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** [http://www.uniprot.org/uniprot/P0ADG7 P0ADG7]
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** [http://www.uniprot.org/uniprot/P56088 P56088]
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** [http://www.uniprot.org/uniprot/P49058 P49058]
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** [http://www.uniprot.org/uniprot/O58045 O58045]
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** [http://www.uniprot.org/uniprot/Q9UY49 Q9UY49]
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** [http://www.uniprot.org/uniprot/Q9PKM2 Q9PKM2]
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** [http://www.uniprot.org/uniprot/Q9RT87 Q9RT87]
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** [http://www.uniprot.org/uniprot/Q9JUD0 Q9JUD0]
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** [http://www.uniprot.org/uniprot/Q59011 Q59011]
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** [http://www.uniprot.org/uniprot/Q9PNN3 Q9PNN3]
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** [http://www.uniprot.org/uniprot/P44334 P44334]
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** [http://www.uniprot.org/uniprot/O67820 O67820]
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** [http://www.uniprot.org/uniprot/P65167 P65167]
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** [http://www.uniprot.org/uniprot/Q9ZL14 Q9ZL14]
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** [http://www.uniprot.org/uniprot/Q9JZB5 Q9JZB5]
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** [http://www.uniprot.org/uniprot/Q9HXM5 Q9HXM5]
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** [http://www.uniprot.org/uniprot/P0C0H6 P0C0H6]
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** [http://www.uniprot.org/uniprot/P42851 P42851]
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** [http://www.uniprot.org/uniprot/P47996 P47996]
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** [http://www.uniprot.org/uniprot/Q9RHG9 Q9RHG9]
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** [http://www.uniprot.org/uniprot/P24547 P24547]
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** [http://www.uniprot.org/uniprot/Q9RHG1 Q9RHG1]
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** [http://www.uniprot.org/uniprot/P31002 P31002]
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** [http://www.uniprot.org/uniprot/Q07152 Q07152]
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** [http://www.uniprot.org/uniprot/P38697 P38697]
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** [http://www.uniprot.org/uniprot/P50094 P50094]
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** [http://www.uniprot.org/uniprot/P39567 P39567]
 +
** [http://www.uniprot.org/uniprot/P50095 P50095]
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** [http://www.uniprot.org/uniprot/Q49729 Q49729]
 +
** [http://www.uniprot.org/uniprot/O14344 O14344]
 +
** [http://www.uniprot.org/uniprot/O32912 O32912]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=IMP dehydrogenase/GMP reductase}}
 +
{{#set: common name=IMP dehydrogenase}}
 +
{{#set: ec number=EC-1.1.1.205}}
 +
{{#set: gene associated=Ec-24_002410|Ec-19_000030}}
 +
{{#set: in pathway=PWY-7221|PWY-5695|PWY-6596}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:32, 21 March 2018

Reaction IMP-DEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • IMP dehydrogenase/GMP reductase
    • IMP dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5695, urate biosynthesis/inosine 5'-phosphate degradation: PWY-5695
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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