Difference between revisions of "RXN-12669"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 4-deoxy-L-threo-hex-4-enopyranuronate degradation
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** acyl-CoA oxidase, partial
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** acyl-CoA oxidase
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** Acyl-CoA oxidase/dehydrogenase, central domain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** 5-dehydro-4-deoxy-D-glucuronate degradation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[KDPGALDOL-RXN]]
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** 1 [[CPD-196]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD0-2108]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-27_004070]]
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** 1 octanoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 trans-oct-2-enoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[RXN-16475]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* Gene: [[Ec-26_004320]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Reaction(s) not found ==
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* Gene: [[Ec-22_002920]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.127-RXN 1.1.1.127-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=5.3.1.17-RXN 5.3.1.17-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
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* Gene: [[Ec-08_006390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-MAP:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
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{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: common name=4-deoxy-L-threo-hex-4-enopyranuronate degradation}}
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{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: common name=5-dehydro-4-deoxy-D-glucuronate degradation}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Ec-26_004320|Ec-22_002920|Ec-08_006390}}
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{{#set: total reaction=5}}
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{{#set: in pathway=PWY-6920}}
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{{#set: completion rate=40.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction RXN-12669

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase, partial
    • acyl-CoA oxidase
    • Acyl-CoA oxidase/dehydrogenase, central domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6920, 6-gingerol analog biosynthesis (engineered): PWY-6920
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12669&oldid=27786"