Difference between revisions of "Ec-12 000650"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNITOL-1-PHOSPHATASE-RXN MANNITOL-1-PHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number...")
(Created page with "Category:Gene == Gene Ec-12_000650 == * left end position: ** 678882 * transcription direction: ** POSITIVE * right end position: ** 687135 * centisome position: ** 8.1439...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNITOL-1-PHOSPHATASE-RXN MANNITOL-1-PHOSPHATASE-RXN] ==
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== Gene Ec-12_000650 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 678882
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.1.3.22 EC-3.1.3.22]
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** POSITIVE
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* right end position:
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** 687135
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* centisome position:
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** 8.143928   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0069_0107
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** Esi0069_0107
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** KAS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.3.1.41-RXN]]
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** 1 [[MANNITOL-1P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[MANNITOL]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 D-mannitol 1-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 D-mannitol[c]
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* Reaction: [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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== Pathways  ==
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** Source: [[orthology-aragem]]
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* [[PWY-3881]], mannitol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3881 PWY-3881]
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** Source: [[orthology-aragem]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
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* [[PWY-6531]], mannitol cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6531 PWY-6531]
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** Source: [[annotation-esiliculosus_genome]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** Assignment: go-term
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== Reconstruction information  ==
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* Reaction: [[ACP-S-ACETYLTRANSFER-RXN]]
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* Category: [[gap-filling]]
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** Source: [[orthology-aragem]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** Source: [[orthology-aragem]]
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*** Tool: [[meneco]]
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* Reaction: [[RXN-10059]]
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**** Comment: [[added for gapfilling]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-10654]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-10658]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-11474]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-11479]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-16615]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-16621]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-16625]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-16629]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9516]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9523]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9527]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9531]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9535]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9539]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9632]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9648]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9651]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9652]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9653]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-9654]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-2141]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN1G-368]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN1G-445]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN1G-460]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN1G-499]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN3O-1803]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-7388]]
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* [[PWY-5994]]
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* [[PWY-5971]]
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* [[PWY-6282]]
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* [[PWY-5965]]
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* [[PWY-5989]]
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* [[PWY-5966]]
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* [[PWYG-321]]
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* [[FASYN-INITIAL-PWY]]
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* [[PWY-7663]]
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* [[PWY-7664]]
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* [[PWY3O-355]]
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* [[PWY0-862]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=678882}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19537 19537]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=687135}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02167 R02167]
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{{#set: centisome position=8.143928    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0069_0107|Esi0069_0107|KAS}}
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{{#set: ec number=EC-3.1.3.22}}
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{{#set: reaction associated=2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|ACP-S-ACETYLTRANSFER-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
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{{#set: in pathway=PWY-3881|PWY-6531}}
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{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5994|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-7663|PWY-7664|PWY3O-355|PWY0-862}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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−
{{#set: reconstruction tool=meneco}}
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−
{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 19:35, 21 March 2018

Gene Ec-12_000650

  • left end position:
    • 678882
  • transcription direction:
    • POSITIVE
  • right end position:
    • 687135
  • centisome position:
    • 8.143928
  • Synonym(s):
    • Esi_0069_0107
    • Esi0069_0107
    • KAS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_000650&oldid=27939"