Difference between revisions of "PWY-7092"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9839 RXN-9839] == * direction: ** LEFT-TO-RIGHT * common name: ** Mannuronan C-5-epimerase ** M...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9839 RXN-9839] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7092 PWY-7092] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
 
* common name:
 
* common name:
** Mannuronan C-5-epimerase
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** neolinustatin bioactivation
** Mannuronan C-5-epimerase 4
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* ec number:
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** [http://enzyme.expasy.org/EC/5.1.3.37 EC-5.1.3.37]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[Poly-beta-D-Mannuronate]][c] '''=>''' 1 [[ALGINATE]][c]
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* [[RXN-13603]]
* With common name(s):
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** 5 associated gene(s):
** 1 mannuronan[c] '''=>''' 1 alginate[c]
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*** [[Ec-26_002410]]
 
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*** [[Ec-04_002190]]
== Genes associated with this reaction  ==
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*** [[Ec-07_001850]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-07_005240]]
* Gene: [[Ec-08_004820]]
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*** [[Ec-20_004800]]
** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-esiliculosus_genome]]
* Gene: [[Ec-25_001850]]
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* [[RXN-9674]]
** Source: [[annotation-esiliculosus_genome]]
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** 5 associated gene(s):
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-07_001850]]
* Gene: [[Ec-24_002750]]
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*** [[Ec-04_002190]]
** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-20_004800]]
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-26_002410]]
* Gene: [[Ec-20_004700]]
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*** [[Ec-07_005240]]
** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
*** Assignment: AUTOMATED-NAME-MATCH
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*** [[annotation-esiliculosus_genome]]
* Gene: [[Ec-11_000400]]
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== Reaction(s) not found ==
** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11733 RXN-11733]
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-07_000890]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_000360]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_006700]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-19_003150]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-27_006700]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-09_003950]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-58024}}
{{#set: common name=Mannuronan C-5-epimerase}}
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{{#set: common name=neolinustatin bioactivation}}
{{#set: common name=Mannuronan C-5-epimerase 4}}
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{{#set: reaction found=2}}
{{#set: ec number=EC-5.1.3.37}}
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{{#set: total reaction=3}}
{{#set: gene associated=Ec-08_004820|Ec-25_001850|Ec-24_002750|Ec-20_004700|Ec-11_000400|Ec-07_000890|Ec-12_000360|Ec-06_006700|Ec-19_003150|Ec-27_006700|Ec-09_003950}}
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{{#set: completion rate=67.0}}
{{#set: in pathway=PWY-6082|PWY-6073}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Pathway PWY-7092

  • taxonomic range:
  • common name:
    • neolinustatin bioactivation
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links