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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11662 RXN-11662] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY] == |
| − | * direction: | + | * taxonomic range: |
| − | ** REVERSIBLE | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| | * common name: | | * common name: |
| − | ** 6-phosphogluconate dehydrogenase, C-terminal-like | + | ** superpathway of polyamine biosynthesis II |
| − | ** 3-hydroxyacyl-CoA dehydrogenase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** polyamn |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers:
| + | '''4''' reactions found over '''7''' reactions in the full pathway |
| − | ** 1 [[NAD]][c] '''+''' 1 [[S-3-HYDROXYBUTANOYL-COA]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ACETOACETYL-COA]][c]
| + | * [[BSUBPOLYAMSYN-PWY]] |
| − | * With common name(s):
| + | ** 0 associated gene: |
| − | ** 1 NAD+[c] '''+''' 1 (S)-3-hydroxybutanoyl-CoA[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 acetoacetyl-CoA[c]
| + | * [[PWY-43]] |
| − | | + | ** 0 associated gene: |
| − | == Genes associated with this reaction ==
| + | * [[PWY-46]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | ** 0 associated gene: |
| − | * Gene: [[Ec-19_005290]]
| + | * [[SPERMINE-SYNTHASE-RXN]] |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | ** 2 associated gene(s): |
| − | *** Assignment: EC-NUMBER
| + | *** [[Ec-04_002790]] |
| − | * Gene: [[Ec-14_006530]]
| + | *** [[Ec-17_001590]] |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | ** 1 reconstruction source(s) associated: |
| − | *** Assignment: GO-TERM
| + | *** [[annotation-esiliculosus_genome]] |
| − | ** Source: [[orthology-aragem]]
| + | == Reaction(s) not found == |
| − | == Pathways ==
| + | |
| − | * [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
| + | |
| − | ** '''4''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | * [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] | + | |
| − | ** '''2''' reactions found over '''5''' reactions in the full pathway | + | |
| − | * [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY]
| + | |
| − | ** '''4''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177] | + | |
| − | ** '''3''' reactions found over '''5''' reactions in the full pathway | + | |
| − | * [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583] | + | |
| − | ** '''4''' reactions found over '''8''' reactions in the full pathway | + | |
| − | * [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883] | + | |
| − | ** '''3''' reactions found over '''6''' reactions in the full pathway | + | |
| − | * [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
| + | |
| − | ** '''4''' reactions found over '''16''' reactions in the full pathway | + | |
| − | * [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] | + | |
| − | ** '''7''' reactions found over '''11''' reactions in the full pathway | + | |
| − | * [[PWY-7779]], methyl tert-butyl ether degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7779 PWY-7779] | + | |
| − | ** '''2''' reactions found over '''10''' reactions in the full pathway | + | |
| − | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
| + | |
| − | ** '''6''' reactions found over '''16''' reactions in the full pathway | + | |
| − | * [[PWY-7778]], 2-methylpropene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778] | + | |
| − | ** '''2''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-aragem]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA: | + | * ARACYC: |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30799 30799] | + | ** [http://metacyc.org/ARA/NEW-IMAGE?object=POLYAMINSYN3-PWY POLYAMINSYN3-PWY] |
| − | * LIGAND-RXN:
| + | {{#set: taxonomic range=TAX-2759}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01975 R01975]
| + | {{#set: taxonomic range=TAX-2}} |
| − | {{#set: direction=REVERSIBLE}} | + | {{#set: common name=superpathway of polyamine biosynthesis II}} |
| − | {{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}} | + | {{#set: common name=polyamn}} |
| − | {{#set: common name=3-hydroxyacyl-CoA dehydrogenase}} | + | {{#set: reaction found=4}} |
| − | {{#set: ec number=EC-1.1.1.35}} | + | {{#set: total reaction=7}} |
| − | {{#set: gene associated=Ec-19_005290|Ec-14_006530}} | + | {{#set: completion rate=57.0}} |
| − | {{#set: in pathway=P162-PWY|PWY-7216|CENTFERM-PWY|PWY-5177|PWY-6583|PWY-6883|PWY-7401|PWY-6863|PWY-7779|PWY-5789|PWY-7778}} | + | |
| − | {{#set: reconstruction category=orthology|annotation}} | + | |
| − | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
