Difference between revisions of "Ec-24 002140"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] == * direction: ** LEFT-TO-RIGHT * common name: ** 71-hydroxychlorophyllide a mo...")
(Created page with "Category:Gene == Gene Ec-24_002140 == * left end position: ** 2479674 * transcription direction: ** POSITIVE * right end position: ** 2483269 * centisome position: ** 49.7...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7677 RXN-7677] ==
+
== Gene Ec-24_002140 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2479674
−
* common name:
+
* transcription direction:
−
** 71-hydroxychlorophyllide a monooxygenase
+
** POSITIVE
−
** chlorophyllide a oxygenase [overall]
+
* right end position:
 +
** 2483269
 +
* centisome position:
 +
** 49.71606   
 
* Synonym(s):
 
* Synonym(s):
−
** chlorophyllide a oxygenase
+
** Esi_0060_0077
−
** chlorophyll-b synthase
+
** Esi0060_0077
−
** CAO
+
** CYP5164A1P
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-3661]]
−
** 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-7015]][c] '''=>''' 1 [[CPD-7014]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[WATER]][c]
+
** Source: [[orthology-aragem]]
−
* With common name(s):
+
* Reaction: [[RXN-8038]]
−
** 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''+''' 1 71-hydroxychlorophyllide a[c] '''=>''' 1 chlorophyllide b[c] '''+''' 1 NADP+[c] '''+''' 2 H2O[c]
+
** Source: [[orthology-aragem]]
−
 
+
* Reaction: [[RXN-8040]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-aragem]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN1F-147]]
−
* Gene: [[Ec-28_000110]]
+
** Source: [[orthology-aragem]]
−
** Source: [[annotation-esiliculosus_genome]]
+
* Reaction: [[RXN1F-148]]
−
*** Assignment: GO-TERM
+
** Source: [[orthology-aragem]]
−
* Gene: [[Ec-14_003590]]
+
* Reaction: [[RXN1F-150]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Assignment: GO-TERM
+
* Reaction: [[RXN1F-151]]
−
* Gene: [[Ec-11_003750]]
+
** Source: [[orthology-aragem]]
−
** Source: [[annotation-esiliculosus_genome]]
+
* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-06_002880]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-06_002840]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-03_003240]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-06_002860]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
== Pathways  ==
+
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-5640]]
 +
* [[PWY-5946]]
 +
* [[PWY-5943]]
 +
* [[PWY-5947]]
 +
* [[PWY-7591]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=2479674}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08204 R08204]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=2483269}}
−
{{#set: common name=71-hydroxychlorophyllide a monooxygenase}}
+
{{#set: centisome position=49.71606    }}
−
{{#set: common name=chlorophyllide a oxygenase [overall]}}
+
{{#set: common name=Esi_0060_0077|Esi0060_0077|CYP5164A1P}}
−
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
+
{{#set: reaction associated=RXN-3661|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151|UNSPECIFIC-MONOOXYGENASE-RXN}}
−
{{#set: gene associated=Ec-28_000110|Ec-14_003590|Ec-11_003750|Ec-06_002880|Ec-06_002840|Ec-03_003240|Ec-06_002860}}
+
{{#set: pathway associated=PWY-5640|PWY-5946|PWY-5943|PWY-5947|PWY-7591}}
−
{{#set: in pathway=PWY-5068}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:37, 21 March 2018

Gene Ec-24_002140

  • left end position:
    • 2479674
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2483269
  • centisome position:
    • 49.71606
  • Synonym(s):
    • Esi_0060_0077
    • Esi0060_0077
    • CYP5164A1P

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_002140&oldid=28233"