Difference between revisions of "OHMETHYLBILANESYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETHYLBILANESYN-RXN OHMETHYLBILANESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hyd...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETHYLBILANESYN-RXN OHMETHYLBILANESYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Tryptophan synthase beta subunit-like PLP-dependent enzyme
+
** hydroxymethylbilane synthase, putative chloroplast precursor
−
** L-threonine ammonia-lyase
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.61 EC-2.5.1.61]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THR]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15056]][c]
+
** 1 [[WATER]][c] '''+''' 4 [[PORPHOBILINOGEN]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-threonine[c] '''=>''' 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
+
** 1 H2O[c] '''+''' 4 porphobilinogen[c] '''=>''' 4 ammonium[c] '''+''' 1 preuroporphyrinogen[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-06_007490]]
+
* Gene: [[Ec-25_002760]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-03_001910]]
+
** Source: [[orthology-aragem]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
+
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
−
** '''4''' reactions found over '''14''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q57989 Q57989]
 +
** [http://www.uniprot.org/uniprot/O29026 O29026]
 +
** [http://www.uniprot.org/uniprot/P64336 P64336]
 +
** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
 +
** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
 +
** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
 +
** [http://www.uniprot.org/uniprot/P28464 P28464]
 +
** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
 +
** [http://www.uniprot.org/uniprot/P56140 P56140]
 +
** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
 +
** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
 +
** [http://www.uniprot.org/uniprot/O26960 O26960]
 +
** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
 +
** [http://www.uniprot.org/uniprot/P06983 P06983]
 +
** [http://www.uniprot.org/uniprot/P13446 P13446]
 +
** [http://www.uniprot.org/uniprot/P08397 P08397]
 +
** [http://www.uniprot.org/uniprot/P22907 P22907]
 +
** [http://www.uniprot.org/uniprot/P19356 P19356]
 +
** [http://www.uniprot.org/uniprot/Q43082 Q43082]
 +
** [http://www.uniprot.org/uniprot/P40129 P40129]
 +
** [http://www.uniprot.org/uniprot/P30527 P30527]
 +
** [http://www.uniprot.org/uniprot/P28789 P28789]
 +
** [http://www.uniprot.org/uniprot/Q60169 Q60169]
 +
** [http://www.uniprot.org/uniprot/Q43316 Q43316]
 +
** [http://www.uniprot.org/uniprot/Q49808 Q49808]
 +
** [http://www.uniprot.org/uniprot/P73660 P73660]
 +
** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
 +
** [http://www.uniprot.org/uniprot/Q09899 Q09899]
 +
** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
+
{{#set: common name=hydroxymethylbilane synthase, putative chloroplast precursor}}
−
{{#set: common name=L-threonine ammonia-lyase}}
+
{{#set: ec number=EC-2.5.1.61}}
−
{{#set: gene associated=Ec-06_007490|Ec-03_001910}}
+
{{#set: gene associated=Ec-25_002760}}
−
{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
+
{{#set: in pathway=PWY-5189|PWY-5188}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction OHMETHYLBILANESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxymethylbilane synthase, putative chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=OHMETHYLBILANESYN-RXN&oldid=28274"