Difference between revisions of "Ec-11 002530"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7967 RXN-7967] == * direction: ** LEFT-TO-RIGHT * common name: ** shikimate 3-dehydrogenase (NA...")
(Created page with "Category:Gene == Gene Ec-11_002530 == * left end position: ** 2652481 * transcription direction: ** NEGATIVE * right end position: ** 2660149 * centisome position: ** 42.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7967 RXN-7967] ==
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== Gene Ec-11_002530 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2652481
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* common name:
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* transcription direction:
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** shikimate 3-dehydrogenase (NADP+)
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.282 EC-1.1.1.282]
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** 2660149
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* centisome position:
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** 42.1721   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0048_0013
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** Esi0048_0013
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.36-RXN]]
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** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[QUINATE]][c] '''=>''' 1 [[DEHYDROQUINATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NAD(P)+[c] '''+''' 1 L-quinate[c] '''=>''' 1 3-dehydroquinate[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-761]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_006010]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[TREHALOSE6PSYN-RXN]]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TRESYN-PWY]]
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* [[PWY-881]]
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* [[TREHALOSESYN-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2652481}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06846 R06846]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2660149}}
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{{#set: common name=shikimate 3-dehydrogenase (NADP+)}}
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{{#set: centisome position=42.1721    }}
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{{#set: ec number=EC-1.1.1.282}}
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{{#set: common name=Esi_0048_0013|Esi0048_0013}}
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{{#set: gene associated=Ec-02_006010}}
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{{#set: reaction associated=2.4.1.36-RXN|RXN-761|TREHALOSE6PSYN-RXN}}
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{{#set: in pathway=}}
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{{#set: pathway associated=TRESYN-PWY|PWY-881|TREHALOSESYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:37, 21 March 2018

Gene Ec-11_002530

  • left end position:
    • 2652481
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2660149
  • centisome position:
    • 42.1721
  • Synonym(s):
    • Esi_0048_0013
    • Esi0048_0013

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_002530&oldid=28279"