Difference between revisions of "RXN0-5224"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V do...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] == * direction: ** REVERSIBLE * common name: ** Carbonic anhydrase ** carbonat...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Aminotransferase class V domain
+
** Carbonic anhydrase
−
** Cysteine desulfurase
+
** carbonate dehydratase
 +
** gamma carbonic anhydrase
 +
** Trimeric LpxA-like
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-CD-Apo-SP-Complex]][c] '''=>''' 1 [[CD-S-SP-Complex]][c]
+
** 1 [[HCO3]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]
+
** 1 hydrogen carbonate[c] '''+''' 1 H+[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-21_003740]]
+
* Gene: [[Ec-03_001960]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-21_005640]]
+
* Gene: [[Ec-10_002770]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-22_000950]]
+
* Gene: [[Ec-06_004120]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-05_001290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-27_005680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-07_004610]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-22_001150]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_004700]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
+
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWYQT-4429]], CO2 fixation into oxaloacetate (anaplerotic): [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4429 PWYQT-4429]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=Aminotransferase class V domain}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
−
{{#set: common name=Cysteine desulfurase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.8.1.7}}
+
{{#set: common name=Carbonic anhydrase}}
−
{{#set: gene associated=Ec-21_003740|Ec-21_005640|Ec-22_000950}}
+
{{#set: common name=carbonate dehydratase}}
−
{{#set: in pathway=PWY-7250}}
+
{{#set: common name=gamma carbonic anhydrase}}
 +
{{#set: common name=Trimeric LpxA-like}}
 +
{{#set: ec number=EC-4.2.1.1}}
 +
{{#set: gene associated=Ec-03_001960|Ec-10_002770|Ec-06_004120|Ec-05_001290|Ec-27_005680|Ec-07_004610|Ec-22_001150|Ec-16_004700}}
 +
{{#set: in pathway=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction RXN0-5224

  • direction:
    • REVERSIBLE
  • common name:
    • Carbonic anhydrase
    • carbonate dehydratase
    • gamma carbonic anhydrase
    • Trimeric LpxA-like
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogen carbonate[c] + 1 H+[c] <=> 1 CO2[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 4 reactions found over 5 reactions in the full pathway
  • PWYQT-4429, CO2 fixation into oxaloacetate (anaplerotic): PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 10 reactions found over 14 reactions in the full pathway
  • CYANCAT-PWY, cyanate degradation: CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5224&oldid=28358"