Difference between revisions of "Ec-21 003320"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
(Created page with "Category:Gene == Gene Ec-21_003320 == * left end position: ** 4282581 * transcription direction: ** NEGATIVE * right end position: ** 4285302 * centisome position: ** 58.0...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN] ==
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== Gene Ec-21_003320 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4282581
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.74 EC-2.3.1.74]
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** NEGATIVE
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* right end position:
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** 4285302
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* centisome position:
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** 58.028614   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0072_0040
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** Esi0072_0040
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PYRNUTRANSHYDROGEN-RXN]]
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** 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[PROTON]][c] '''+''' 3 [[MALONYL-COA]][c] '''=>''' 4 [[CO-A]][c] '''+''' 1 [[APIGENIN]][c] '''+''' 3 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 4-coumaroyl-CoA[c] '''+''' 3 H+[c] '''+''' 3 malonyl-CoA[c] '''=>''' 4 coenzyme A[c] '''+''' 1 2',4,4',6'-tetrahydroxychalcone[c] '''+''' 3 CO2[c]
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== Pathways associated ==
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* [[PWY-5083]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_006660]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-02_004580]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-07_003670]]
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6316]], aromatic polyketides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6316 PWY-6316]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5135]], xanthohumol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4282581}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11128 11128]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4285302}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
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{{#set: centisome position=58.028614    }}
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* UNIPROT:
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{{#set: common name=Esi_0072_0040|Esi0072_0040}}
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** [http://www.uniprot.org/uniprot/Q43188 Q43188]
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{{#set: reaction associated=PYRNUTRANSHYDROGEN-RXN}}
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** [http://www.uniprot.org/uniprot/O04934 O04934]
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{{#set: pathway associated=PWY-5083}}
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** [http://www.uniprot.org/uniprot/P17957 P17957]
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** [http://www.uniprot.org/uniprot/P30081 P30081]
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** [http://www.uniprot.org/uniprot/P30080 P30080]
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** [http://www.uniprot.org/uniprot/Q9S9C0 Q9S9C0]
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** [http://www.uniprot.org/uniprot/Q9S9B9 Q9S9B9]
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** [http://www.uniprot.org/uniprot/P23419 P23419]
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** [http://www.uniprot.org/uniprot/P26018 P26018]
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** [http://www.uniprot.org/uniprot/P22928 P22928]
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** [http://www.uniprot.org/uniprot/P30079 P30079]
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** [http://www.uniprot.org/uniprot/Q01287 Q01287]
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** [http://www.uniprot.org/uniprot/Q01288 Q01288]
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** [http://www.uniprot.org/uniprot/P51078 P51078]
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** [http://www.uniprot.org/uniprot/P51080 P51080]
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** [http://www.uniprot.org/uniprot/P30078 P30078]
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** [http://www.uniprot.org/uniprot/Q01286 Q01286]
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** [http://www.uniprot.org/uniprot/P30073 P30073]
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** [http://www.uniprot.org/uniprot/P30074 P30074]
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** [http://www.uniprot.org/uniprot/P30076 P30076]
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** [http://www.uniprot.org/uniprot/P30077 P30077]
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** [http://www.uniprot.org/uniprot/P51089 P51089]
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** [http://www.uniprot.org/uniprot/P51075 P51075]
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** [http://www.uniprot.org/uniprot/P16107 P16107]
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** [http://www.uniprot.org/uniprot/P51077 P51077]
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** [http://www.uniprot.org/uniprot/P51079 P51079]
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** [http://www.uniprot.org/uniprot/P30075 P30075]
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** [http://www.uniprot.org/uniprot/P51081 P51081]
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** [http://www.uniprot.org/uniprot/P51082 P51082]
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** [http://www.uniprot.org/uniprot/P48390 P48390]
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** [http://www.uniprot.org/uniprot/P48405 P48405]
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** [http://www.uniprot.org/uniprot/P48406 P48406]
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** [http://www.uniprot.org/uniprot/P23569 P23569]
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** [http://www.uniprot.org/uniprot/P13416 P13416]
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** [http://www.uniprot.org/uniprot/P13417 P13417]
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** [http://www.uniprot.org/uniprot/P17818 P17818]
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** [http://www.uniprot.org/uniprot/P13114 P13114]
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** [http://www.uniprot.org/uniprot/P08894 P08894]
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** [http://www.uniprot.org/uniprot/P22924 P22924]
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** [http://www.uniprot.org/uniprot/P22925 P22925]
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** [http://www.uniprot.org/uniprot/P22926 P22926]
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** [http://www.uniprot.org/uniprot/P22927 P22927]
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** [http://www.uniprot.org/uniprot/P06515 P06515]
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** [http://www.uniprot.org/uniprot/P24826 P24826]
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** [http://www.uniprot.org/uniprot/P19168 P19168]
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** [http://www.uniprot.org/uniprot/P24825 P24825]
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** [http://www.uniprot.org/uniprot/P24824 P24824]
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** [http://www.uniprot.org/uniprot/Q40005 Q40005]
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** [http://www.uniprot.org/uniprot/Q96562 Q96562]
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** [http://www.uniprot.org/uniprot/O22047 O22047]
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** [http://www.uniprot.org/uniprot/O04971 O04971]
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** [http://www.uniprot.org/uniprot/P48389 P48389]
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** [http://www.uniprot.org/uniprot/P48398 P48398]
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** [http://www.uniprot.org/uniprot/P48399 P48399]
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** [http://www.uniprot.org/uniprot/Q96568 Q96568]
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** [http://www.uniprot.org/uniprot/P48397 P48397]
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** [http://www.uniprot.org/uniprot/O04966 O04966]
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** [http://www.uniprot.org/uniprot/O04967 O04967]
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** [http://www.uniprot.org/uniprot/O04968 O04968]
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** [http://www.uniprot.org/uniprot/O04969 O04969]
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** [http://www.uniprot.org/uniprot/O04970 O04970]
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** [http://www.uniprot.org/uniprot/Q41292 Q41292]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.3.1.74}}
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{{#set: gene associated=Ec-07_006660|Ec-02_004580|Ec-07_003670}}
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{{#set: in pathway=PWY1F-FLAVSYN|PWY-6316|PWY-7397|PWY-5135|PWY-6787}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:38, 21 March 2018

Gene Ec-21_003320

  • left end position:
    • 4282581
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4285302
  • centisome position:
    • 58.028614
  • Synonym(s):
    • Esi_0072_0040
    • Esi0072_0040

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_003320&oldid=28365"