Difference between revisions of "RXN-13414"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTP-PYROP-RXN DUTP-PYROP-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13414 RXN-13414] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyhypusine synthase * Sy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUTP-PYROP-RXN DUTP-PYROP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13414 RXN-13414] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/3.6.1.19 EC-3.6.1.19]
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** Deoxyhypusine synthase
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** [http://enzyme.expasy.org/EC/3.6.1.23 EC-3.6.1.23]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[DUTP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[DUMP]][c]
+
** 1 [[SPERMIDINE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-14378]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 dUTP[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 dUMP[c]
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** 1 spermidine[c] '''+''' 1 NAD+[c] '''=>''' 1 dehydrospermidine[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-13_002810]]
+
* Gene: [[Ec-27_002000]]
−
** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7206 PWY-7206]
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* [[PWY-5905]], hypusine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''14''' reactions found over '''17''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10248 10248]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19908 19908]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R02100 R02100]
+
−
* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q89932 Q89932]
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−
** [http://www.uniprot.org/uniprot/P33316 P33316]
+
−
** [http://www.uniprot.org/uniprot/O15923 O15923]
+
−
** [http://www.uniprot.org/uniprot/Q9PMK9 Q9PMK9]
+
−
** [http://www.uniprot.org/uniprot/Q9Z9C2 Q9Z9C2]
+
−
** [http://www.uniprot.org/uniprot/Q9JUW1 Q9JUW1]
+
−
** [http://www.uniprot.org/uniprot/P43792 P43792]
+
−
** [http://www.uniprot.org/uniprot/P32518 P32518]
+
−
** [http://www.uniprot.org/uniprot/P68635 P68635]
+
−
** [http://www.uniprot.org/uniprot/P68634 P68634]
+
−
** [http://www.uniprot.org/uniprot/Q76RE7 Q76RE7]
+
−
** [http://www.uniprot.org/uniprot/P03195 P03195]
+
−
** [http://www.uniprot.org/uniprot/Q89662 Q89662]
+
−
** [http://www.uniprot.org/uniprot/Q00030 Q00030]
+
−
** [http://www.uniprot.org/uniprot/P33317 P33317]
+
−
** [http://www.uniprot.org/uniprot/Q45920 Q45920]
+
−
** [http://www.uniprot.org/uniprot/P43058 P43058]
+
−
** [http://www.uniprot.org/uniprot/O80091 O80091]
+
−
** [http://www.uniprot.org/uniprot/O36404 O36404]
+
−
** [http://www.uniprot.org/uniprot/O41033 O41033]
+
−
** [http://www.uniprot.org/uniprot/Q9YML1 Q9YML1]
+
−
** [http://www.uniprot.org/uniprot/O39251 O39251]
+
−
** [http://www.uniprot.org/uniprot/O01934 O01934]
+
−
** [http://www.uniprot.org/uniprot/P10234 P10234]
+
−
** [http://www.uniprot.org/uniprot/P06968 P06968]
+
−
** [http://www.uniprot.org/uniprot/P09254 P09254]
+
−
** [http://www.uniprot.org/uniprot/P28892 P28892]
+
−
** [http://www.uniprot.org/uniprot/P28893 P28893]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.6.1.19}}
+
{{#set: common name=Deoxyhypusine synthase}}
−
{{#set: ec number=EC-3.6.1.23}}
+
{{#set: gene associated=Ec-27_002000}}
−
{{#set: gene associated=Ec-13_002810}}
+
{{#set: in pathway=PWY-5905}}
−
{{#set: in pathway=PWY-7206|PWY-7184|PWY-7187|PWY-6545|PWY0-166}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:38, 21 March 2018

Reaction RXN-13414

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Deoxyhypusine synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 spermidine[c] + 1 NAD+[c] => 1 dehydrospermidine[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5905, hypusine biosynthesis: PWY-5905
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13414&oldid=28372"