Difference between revisions of "Ec-22 003320"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** choline/e...")
(Created page with "Category:Gene == Gene Ec-22_003320 == * left end position: ** 3786298 * transcription direction: ** POSITIVE * right end position: ** 3813925 * centisome position: ** 83.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
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== Gene Ec-22_003320 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3786298
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* common name:
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* transcription direction:
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** choline/ethanolamine kinase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.1.32 EC-2.7.1.32]
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** 3813925
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* centisome position:
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** 83.84462   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0039_0126
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** Esi0039_0126
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** TPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN1G-1435]]
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** 1 [[ATP]][c] '''+''' 1 [[CHOLINE]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 ATP[c] '''+''' 1 choline[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* Reaction: [[RXN1G-1436]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1G-1437]]
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* Gene: [[Ec-16_004110]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN1G-1438]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN1G-1439]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[TREHALOSE6PSYN-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[TREHALOSEPHOSPHA-RXN]]
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* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWYG-321]]
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* [[TREHALOSESYN-PWY]]
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* [[TRESYN-PWY]]
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* [[PWY-881]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3786298}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12837 12837]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3813925}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
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{{#set: centisome position=83.84462    }}
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* UNIPROT:
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{{#set: common name=Esi_0039_0126|Esi0039_0126|TPS}}
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** [http://www.uniprot.org/uniprot/P20485 P20485]
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{{#set: reaction associated=RXN1G-1435|RXN1G-1436|RXN1G-1437|RXN1G-1438|RXN1G-1439|TREHALOSE6PSYN-RXN|TREHALOSEPHOSPHA-RXN}}
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** [http://www.uniprot.org/uniprot/Q01134 Q01134]
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{{#set: pathway associated=PWYG-321|TREHALOSESYN-PWY|TRESYN-PWY|PWY-881}}
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** [http://www.uniprot.org/uniprot/Q42809 Q42809]
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** [http://www.uniprot.org/uniprot/Q42810 Q42810]
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** [http://www.uniprot.org/uniprot/Q42811 Q42811]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=choline/ethanolamine kinase}}
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{{#set: ec number=EC-2.7.1.32}}
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{{#set: gene associated=Ec-16_004110}}
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{{#set: in pathway=PWY-7782|PWY3O-450}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:39, 21 March 2018

Gene Ec-22_003320

  • left end position:
    • 3786298
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3813925
  • centisome position:
    • 83.84462
  • Synonym(s):
    • Esi_0039_0126
    • Esi0039_0126
    • TPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-22_003320&oldid=28463"