Difference between revisions of "Ec-08 002360"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MEVALONATE-KINASE-RXN MEVALONATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** GHMP k...")
(Created page with "Category:Gene == Gene Ec-08_002360 == * left end position: ** 2181247 * transcription direction: ** POSITIVE * right end position: ** 2190229 * centisome position: ** 32.5...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MEVALONATE-KINASE-RXN MEVALONATE-KINASE-RXN] ==
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== Gene Ec-08_002360 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2181247
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* common name:
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* transcription direction:
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** GHMP kinase, C-terminal domain
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.1.36 EC-2.7.1.36]
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** 2190229
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* centisome position:
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** 32.57019   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0007_0157
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** Esi0007_0157
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-2161]]
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** 1 [[MEVALONATE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-499]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 (R)-mevalonate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 (R)-mevalonate 5-phosphate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_004370]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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* Reaction: [[SERINE--TRNA-LIGASE-RXN]]
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== Pathways  ==
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
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* [[PWY0-901]]
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* [[PWY-6281]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2181247}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17065 17065]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2190229}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02245 R02245]
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{{#set: centisome position=32.57019    }}
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* UNIPROT:
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{{#set: common name=Esi_0007_0157|Esi0007_0157}}
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** [http://www.uniprot.org/uniprot/P17256 P17256]
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{{#set: reaction associated=RXN0-2161|SERINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q03426 Q03426]
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{{#set: pathway associated=TRNA-CHARGING-PWY|PWY0-901|PWY-6281}}
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** [http://www.uniprot.org/uniprot/P07277 P07277]
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** [http://www.uniprot.org/uniprot/Q58487 Q58487]
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** [http://www.uniprot.org/uniprot/P46086 P46086]
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** [http://www.uniprot.org/uniprot/Q09780 Q09780]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=GHMP kinase, C-terminal domain}}
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{{#set: ec number=EC-2.7.1.36}}
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{{#set: gene associated=Ec-26_004370}}
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{{#set: in pathway=PWY-922|PWY-6174|PWY-7391}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:39, 21 March 2018

Gene Ec-08_002360

  • left end position:
    • 2181247
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2190229
  • centisome position:
    • 32.57019
  • Synonym(s):
    • Esi_0007_0157
    • Esi0007_0157

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_002360&oldid=28514"