Difference between revisions of "RXN-11026"

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(Created page with "Category:Gene == Gene Ec-12_004070 == * left end position: ** 3771555 * transcription direction: ** POSITIVE * right end position: ** 3776472 * centisome position: ** 45.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11026 RXN-11026] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-12_004070 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11026 RXN-11026] ==
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* left end position:
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* direction:
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** 3771555
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** acyl-CoA oxidase, partial
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* right end position:
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** acyl-CoA oxidase
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** 3776472
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** Acyl-CoA oxidase/dehydrogenase, central domain
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* centisome position:
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* ec number:
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** 45.2439   
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0090_0026
 
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** Esi0090_0026
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[F16BDEPHOS-RXN]]
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* With identifiers:
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** 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* With common name(s):
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** 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-22_002920]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-08_006390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-26_004320]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[GLUCONEO-PWY]]
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* [[SUCSYN-PWY]]
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* [[GLYCOLYSIS]]
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* [[CALVIN-PWY]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[PWY66-399]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3771555}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: right end position=3776472}}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: centisome position=45.2439    }}
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{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: common name=Esi_0090_0026|Esi0090_0026}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: reaction associated=F16BDEPHOS-RXN}}
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{{#set: gene associated=Ec-22_002920|Ec-08_006390|Ec-26_004320}}
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{{#set: pathway associated=GLUCONEO-PWY|SUCSYN-PWY|GLYCOLYSIS|CALVIN-PWY|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: in pathway=PWY-5136|PWY-7288|PWY66-391}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:41, 21 March 2018

Reaction RXN-11026

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase, partial
    • acyl-CoA oxidase
    • Acyl-CoA oxidase/dehydrogenase, central domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 2 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11026&oldid=28665"