Difference between revisions of "RXN-11026"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-12_004070 == * left end position: ** 3771555 * transcription direction: ** POSITIVE * right end position: ** 3776472 * centisome position: ** 45.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11026 RXN-11026] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-12_004070 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11026 RXN-11026] ==
−
* left end position:
+
* direction:
−
** 3771555
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** acyl-CoA oxidase, partial
−
* right end position:
+
** acyl-CoA oxidase
−
** 3776472
+
** Acyl-CoA oxidase/dehydrogenase, central domain
−
* centisome position:
+
* ec number:
−
** 45.2439   
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0090_0026
 
−
** Esi0090_0026
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[F16BDEPHOS-RXN]]
+
* With identifiers:
 +
** 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 +
* With common name(s):
 +
** 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-22_002920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-08_006390]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_004320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[GLUCONEO-PWY]]
+
−
* [[SUCSYN-PWY]]
+
−
* [[GLYCOLYSIS]]
+
−
* [[CALVIN-PWY]]
+
−
* [[PWY-5484]]
+
−
* [[P185-PWY]]
+
−
* [[PWY66-399]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3771555}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=acyl-CoA oxidase, partial}}
−
{{#set: right end position=3776472}}
+
{{#set: common name=acyl-CoA oxidase}}
−
{{#set: centisome position=45.2439    }}
+
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
−
{{#set: common name=Esi_0090_0026|Esi0090_0026}}
+
{{#set: ec number=EC-1.3.3.6}}
−
{{#set: reaction associated=F16BDEPHOS-RXN}}
+
{{#set: gene associated=Ec-22_002920|Ec-08_006390|Ec-26_004320}}
−
{{#set: pathway associated=GLUCONEO-PWY|SUCSYN-PWY|GLYCOLYSIS|CALVIN-PWY|PWY-5484|P185-PWY|PWY66-399}}
+
{{#set: in pathway=PWY-5136|PWY-7288|PWY66-391}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN-11026

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase, partial
    • acyl-CoA oxidase
    • Acyl-CoA oxidase/dehydrogenase, central domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 2 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11026&oldid=28665"