Difference between revisions of "PWY-5629"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(Created page with "Category:Gene == Gene Ec-12_006200 == * left end position: ** 5586987 * transcription direction: ** POSITIVE * right end position: ** 5590541 * centisome position: ** 67.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
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== Gene Ec-12_006200 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5586987
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* common name:
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* transcription direction:
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** pyrroline-5-carboxylate reductase
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** POSITIVE
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** Pyrroline-5-carboxylate reductase
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* right end position:
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** NAD(P)-binding domain
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** 5590541
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
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** 67.02198   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0115_0018
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** Esi0115_0018
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** MHflX
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN0-5462]]
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** esiliculosus_genome
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* With common name(s):
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***automated-name-match
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** 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_007340]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-05_006410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-07_007350]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_007360]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-03_004680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=5586987}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
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{{#set: right end position=5590541}}
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* UNIPROT:
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{{#set: centisome position=67.02198    }}
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** [http://www.uniprot.org/uniprot/P32322 P32322]
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{{#set: common name=Esi_0115_0018|Esi0115_0018|MHflX}}
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** [http://www.uniprot.org/uniprot/P27771 P27771]
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{{#set: reaction associated=RXN0-5462}}
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** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
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** [http://www.uniprot.org/uniprot/P14383 P14383]
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** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
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** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
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** [http://www.uniprot.org/uniprot/Q12740 Q12740]
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** [http://www.uniprot.org/uniprot/P22008 P22008]
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** [http://www.uniprot.org/uniprot/P54904 P54904]
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** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
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** [http://www.uniprot.org/uniprot/P17817 P17817]
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** [http://www.uniprot.org/uniprot/P32263 P32263]
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** [http://www.uniprot.org/uniprot/Q12641 Q12641]
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** [http://www.uniprot.org/uniprot/P46725 P46725]
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** [http://www.uniprot.org/uniprot/P74572 P74572]
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** [http://www.uniprot.org/uniprot/Q04708 Q04708]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyrroline-5-carboxylate reductase}}
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{{#set: common name=Pyrroline-5-carboxylate reductase}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: ec number=EC-1.5.1.2}}
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{{#set: gene associated=Ec-07_007340|Ec-05_006410|Ec-07_007350|Ec-07_007360|Ec-03_004680}}
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{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:24, 17 March 2018

Gene Ec-12_006200

  • left end position:
    • 5586987
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5590541
  • centisome position:
    • 67.02198
  • Synonym(s):
    • Esi_0115_0018
    • Esi0115_0018
    • MHflX

Reactions associated

  • RXN0-5462
    • esiliculosus_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5629&oldid=8813"