Difference between revisions of "Ec-06 002460"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-branched fatty acy...")
(Created page with "Category:Gene == Gene Ec-06_002460 == * left end position: ** 1789639 * transcription direction: ** POSITIVE * right end position: ** 1799033 * centisome position: ** 20.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] ==
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== Gene Ec-06_002460 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1789639
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* common name:
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* transcription direction:
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** 3-methyl-branched fatty acyl-CoA 2-hydroxylase
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** POSITIVE
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** Phytanoyl-CoA dioxygenase
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* right end position:
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* ec number:
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** 1799033
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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* centisome position:
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** 20.4349   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0384_0020
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** Esi0384_0020
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
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** 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-OH-3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[SUC]][c]
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* With common name(s):
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** 1 a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 succinate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-23_003040]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-22_003660]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_011990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001740]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RXN-15681]]
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* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-4041]]
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* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1789639}}
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{{#set: common name=3-methyl-branched fatty acyl-CoA 2-hydroxylase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Phytanoyl-CoA dioxygenase}}
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{{#set: right end position=1799033}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: centisome position=20.4349    }}
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{{#set: gene associated=Ec-23_003040|Ec-22_003660|Ec-01_011990|Ec-01_001740}}
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{{#set: common name=Esi_0384_0020|Esi0384_0020}}
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{{#set: in pathway=PWY66-387}}
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{{#set: reaction associated=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN|RXN-15681}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-4041|PWY-7533}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:43, 21 March 2018

Gene Ec-06_002460

  • left end position:
    • 1789639
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1799033
  • centisome position:
    • 20.4349
  • Synonym(s):
    • Esi_0384_0020
    • Esi0384_0020

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_002460&oldid=28926"